Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00138
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 145 1e-35
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 145 1e-35
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 74 5e-14
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 73 9e-14
06_01_0479 + 3419657-3420337 71 4e-13
06_01_0539 + 3869156-3869908 70 7e-13
06_01_0529 + 3831100-3831852 70 7e-13
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 58 2e-09
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 52 2e-07
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 51 3e-07
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 51 3e-07
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 43 1e-04
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 38 0.003
05_05_0100 + 22388457-22388561,22388657-22388808,22388897-223892... 29 1.5
05_05_0099 - 22381586-22382604,22382683-22383056,22383145-223832... 29 1.5
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 28 2.7
01_06_1309 - 36170947-36171077,36171227-36172198,36172285-361724... 28 2.7
04_03_0047 + 10118929-10119276 27 6.1
06_02_0020 - 10675108-10676101,10676204-10676865,10676981-10677322 27 8.1
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 145 bits (351), Expect = 1e-35
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 182
QSGGVRPFGVSLLI G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+
Sbjct: 183 QSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 242
Query: 183 ELDDAVHTAILTLKEGFEGQMTAD 254
ELDDA+HTAILTLKEG+EGQ++A+
Sbjct: 243 ELDDAIHTAILTLKEGYEGQISAN 266
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 145 bits (351), Expect = 1e-35
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 182
QSGGVRPFGVSLLI G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+
Sbjct: 146 QSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 205
Query: 183 ELDDAVHTAILTLKEGFEGQMTAD 254
ELDDA+HTAILTLKEG+EGQ++A+
Sbjct: 206 ELDDAIHTAILTLKEGYEGQISAN 229
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 73.7 bits (173), Expect = 5e-14
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEE--GRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 176
QSGGVRPFG+S LI G++ +P L+Q DPSG + AWKA A G+N N+ + FLEK Y +
Sbjct: 191 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-K 249
Query: 177 DLELDDAVHTAILTLKEGFE 236
D + + AI L E E
Sbjct: 250 DTSGKETIKLAIRALLEVVE 269
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 72.9 bits (171), Expect = 9e-14
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEE--GRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 176
QSGGVRPFG+S LI G++ +P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
>06_01_0479 + 3419657-3420337
Length = 226
Score = 70.9 bits (166), Expect = 4e-13
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 179
Q GG+RPFGVS L GW++ + L+ DPSG Y WKA A+G N ++ L++ Y +
Sbjct: 99 QFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDG 158
Query: 180 LELDDAVHTAILTLKEGFEG-QMTADT*KLASV 275
L ++AV A+ L + + +TA+ +LA V
Sbjct: 159 LTREEAVALALKVLSKTMDSTSLTAEKLELAEV 191
>06_01_0539 + 3869156-3869908
Length = 250
Score = 70.1 bits (164), Expect = 7e-13
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 179
Q GG+RPFGVS L GW++ + L+ DPSG Y WKA A+G N ++ L++ Y +
Sbjct: 123 QFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDG 182
Query: 180 LELDDAVHTAILTLKEGFEG-QMTADT*KLASV 275
+ ++AV A+ L + + +TA+ +LA V
Sbjct: 183 MTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
>06_01_0529 + 3831100-3831852
Length = 250
Score = 70.1 bits (164), Expect = 7e-13
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 179
Q GG+RPFGVS L GW++ + L+ DPSG Y WKA A+G N ++ L++ Y +
Sbjct: 123 QFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDG 182
Query: 180 LELDDAVHTAILTLKEGFEG-QMTADT*KLASV 275
+ ++AV A+ L + + +TA+ +LA V
Sbjct: 183 MTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +3
Query: 18 RPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDLELD 191
RP+GV LL+ G +E +L+ PSG YF ++A A+G KTFLE+R+ D +
Sbjct: 128 RPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPE 187
Query: 192 DAVHTAILTLKEGFEGQ-MTADT*KLASVTR 281
+ A+ +KE +G+ +T+ +A V R
Sbjct: 188 QLIKDALSAIKETLQGEKLTSSNCTVAIVGR 218
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 51.6 bits (118), Expect = 2e-07
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGWEE--GRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKR 167
Q +RP+GV +I G +E G P LF CDP+G +FA KAT+ G FLE+R
Sbjct: 185 QHAQIRPYGVVSMIFGIDEEKGTPELFTCDPAGQFFAHKATSAGPKEKEVMNFLEER 241
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 18 RPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 182
RPFGVSLLI G +E P L+ DPSG ++ A A+G + L+++Y + L
Sbjct: 146 RPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKSL 200
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 51.2 bits (117), Expect = 3e-07
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 QSGGVRPFGVSLLICGW-EEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 179
Q +RP GV ++ G+ EE LF+CDP+G +F KAT+ G FLEK+ +D
Sbjct: 127 QHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDD 186
Query: 180 --LELDDAVHTAILTLK 224
++ V AI L+
Sbjct: 187 PQFSYEETVQIAISALQ 203
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 15 VRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDD 194
+RPFG +++ G++ P L+ +PSG + + A+GK KT +EK +L +
Sbjct: 137 LRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCRE 196
Query: 195 AV 200
+
Sbjct: 197 GI 198
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 15 VRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKT 152
+RPFG +++ G++ P L+ +PSG + + A+GK KT
Sbjct: 129 LRPFGCGVILGGYDRDGPQLYMIEPSGLSYKYFGAALGKGRQAAKT 174
>05_05_0100 +
22388457-22388561,22388657-22388808,22388897-22389270,
22389349-22390367
Length = 549
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 27 GVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 131
G+ L+ GW +G Y+ QC P G+Y ++ T G+
Sbjct: 88 GIRQLLSGWADGPSYITQCPIQPGGSY-VYRFTITGQ 123
>05_05_0099 -
22381586-22382604,22382683-22383056,22383145-22383296,
22383392-22383496
Length = 549
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 27 GVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 131
G+ L+ GW +G Y+ QC P G+Y ++ T G+
Sbjct: 88 GIRQLLSGWADGPSYITQCPIQPGGSY-VYRFTITGQ 123
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 118 QPWERTLIMEKLSLKKDIQKTWS 186
QPWE+ L+M L K +Q+ W+
Sbjct: 440 QPWEKLLLMSGKPLSKCMQEAWA 462
>01_06_1309 -
36170947-36171077,36171227-36172198,36172285-36172413,
36172535-36172779,36172904-36173055,36173202-36173306
Length = 577
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 27 GVSLLICGWEEGRPYLFQC--DPSGAYFAWKATAMGK 131
G+ L GW +G Y+ QC P G+Y +K T G+
Sbjct: 88 GIRQLRSGWADGPAYITQCPIQPGGSY-VYKYTITGQ 123
>04_03_0047 + 10118929-10119276
Length = 115
Score = 27.1 bits (57), Expect = 6.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 70 TCSSVTPPEPILHGKPQPWERTLIMEKLS 156
T +++ PP P P PW R+L++ L+
Sbjct: 21 TSTAIVPPPPRRASVPLPWLRSLLLPPLA 49
>06_02_0020 - 10675108-10676101,10676204-10676865,10676981-10677322
Length = 665
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 157 RKVFPLLKFFPMAVAFHAK*APEGSHWNR 71
RKV LL F M+VA+ A + G +W R
Sbjct: 174 RKVLMLLATFVMSVAYVAGLSAPGGYWER 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,381,864
Number of Sequences: 37544
Number of extensions: 270069
Number of successful extensions: 569
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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