Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00134
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 229 IIVLMNTFSIMHENIMSDIETTTPDRWIENEKIMKSKLMKL 351
           +I+L+  + I+ +N+MS+  T   ++ I+N  +   K + L
Sbjct: 250 LIILLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVL 290


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +3

Query: 591 QRQTLVVVSMPGLNDW---VQQLEDKQNYLKHLEEPPNTS 701
           QR  L++    G+N     ++ +E  Q  + HLE  PN S
Sbjct: 108 QRAALILRLREGMNSLSRVLKSIEKHQGAVCHLETRPNQS 147


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 536 SISVFSTFNLTSFVVVLNTSNFSK 465
           SISVFS F + SFV +   +   K
Sbjct: 213 SISVFSFFFMPSFVDIFRLTFVDK 236


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 94  Y*ILLISEKSMLRVLSCTILNMYYLD 17
           Y ILLI+ +S L V+SC    +  LD
Sbjct: 635 YQILLITFQSGLNVVSCINFPLGVLD 660


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,648
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)