Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00134
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0463 - 3424951-3425065,3425191-3425258,3425362-3425586,342...    37   0.022
01_07_0229 + 42161770-42164562                                         29   3.3  
06_02_0347 - 14926801-14926821,14927615-14928529,14928530-149286...    29   5.7  
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589...    28   7.6  

>01_01_0463 -
           3424951-3425065,3425191-3425258,3425362-3425586,
           3425669-3425804,3425905-3426107,3426227-3426340,
           3426432-3426506,3426625-3426783,3426868-3427038,
           3427227-3427274,3427366-3427491,3427611-3427718,
           3427800-3427913,3428320-3428496
          Length = 612

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +1

Query: 322 KIMKSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFE 480
           ++ +S L +     ++P+++ +    +    LVRFRGM+QDM   EFY   F+
Sbjct: 45  EVFRSFLFEQGGLDKVPVLDESNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFK 97


>01_07_0229 + 42161770-42164562
          Length = 930

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 663 NYLK--HLEEPPNTSKRLHPSTKLKRSYDDTEDNLVKW 770
           +YLK   + E PN     H  T+LK SYD  +D  +K+
Sbjct: 337 SYLKKSRIHEIPNMGNTSHIYTRLKLSYDYLQDKQIKY 374


>06_02_0347 -
           14926801-14926821,14927615-14928529,14928530-14928634,
           14928698-14929003
          Length = 448

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 627 LNDWVQQLEDKQNYLKHLEEPPNTSKRLHPSTKLKR 734
           +ND VQQL+  Q  + H E PPN    +    ++ R
Sbjct: 1   MNDLVQQLQTLQLNMPHREPPPNEDDDIEEEDEVGR 36


>01_01_0762 +
           5889925-5890136,5891110-5891273,5891755-5891878,
           5891941-5892073,5892629-5892732,5892867-5895780,
           5895876-5895965,5896251-5896355,5896633-5896740,
           5896826-5896876
          Length = 1334

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 573 ENLISGQRQTLVVVSMPGLNDWVQQLEDKQNYLKHLEEP 689
           E  +  Q+  +    +PG +DW  QL+D+QN+L   + P
Sbjct: 109 EKAVKNQKSHIHFTYVPG-SDWHAQLKDEQNHLLSSDLP 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,733
Number of Sequences: 37544
Number of extensions: 308959
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)