Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00134
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457299-1|CAG33580.1|  640|Homo sapiens FLJ13081 protein.             46   2e-04
BC007219-1|AAH07219.1|  640|Homo sapiens chromosome 10 open read...    46   2e-04
BC004183-1|AAH04183.1|  640|Homo sapiens chromosome 10 open read...    46   2e-04
AK023143-1|BAB14427.1|  642|Homo sapiens protein ( Homo sapiens ...    46   2e-04

>CR457299-1|CAG33580.1|  640|Homo sapiens FLJ13081 protein.
          Length = 640

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/56 (41%), Positives = 29/56 (51%)
 Frame = +1

Query: 331 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 498
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNT 92



 Score = 39.1 bits (87), Expect = 0.018
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 492 NNK*SKVKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLEDKQNY 668
           N K   +  GKYRD A     ++++  S    + +RQT   V +PG + WV++     N 
Sbjct: 91  NTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKEAYVNANQ 150

Query: 669 LKHLEEPPNTSKRLHPSTKLKRSYDDTED 755
            +     P+TS   +  ++ KRSY+D +D
Sbjct: 151 AR---VSPSTS---YTPSRYKRSYEDDDD 173


>BC007219-1|AAH07219.1|  640|Homo sapiens chromosome 10 open reading
           frame 119 protein.
          Length = 640

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/56 (41%), Positives = 29/56 (51%)
 Frame = +1

Query: 331 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 498
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNT 92



 Score = 38.3 bits (85), Expect = 0.032
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 492 NNK*SKVKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLEDKQNY 668
           N K   +  GKYRD A     ++++  S    + +RQT   V +PG + WV++     N 
Sbjct: 91  NTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKEAYVNANQ 150

Query: 669 LKHLEEPPNTSKRLHPSTKLKRSYDDTED 755
            +     P+TS   +  ++ KRSY+D +D
Sbjct: 151 AR---VSPSTS---YTPSRHKRSYEDDDD 173


>BC004183-1|AAH04183.1|  640|Homo sapiens chromosome 10 open reading
           frame 119 protein.
          Length = 640

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/56 (41%), Positives = 29/56 (51%)
 Frame = +1

Query: 331 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 498
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNT 92



 Score = 38.3 bits (85), Expect = 0.032
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 492 NNK*SKVKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLEDKQNY 668
           N K   +  GKYRD A     ++++  S    + +RQT   V +PG + WV++     N 
Sbjct: 91  NTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKEAYVNANQ 150

Query: 669 LKHLEEPPNTSKRLHPSTKLKRSYDDTED 755
            +     P+TS   +  ++ KRSY+D +D
Sbjct: 151 AR---VSPSTS---YTPSRHKRSYEDDDD 173


>AK023143-1|BAB14427.1|  642|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13081 fis, clone NT2RP3002033. ).
          Length = 642

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/56 (41%), Positives = 29/56 (51%)
 Frame = +1

Query: 331 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 498
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNT 92



 Score = 38.3 bits (85), Expect = 0.032
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 492 NNK*SKVKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLEDKQNY 668
           N K   +  GKYRD A     ++++  S    + +RQT   V +PG + WV++     N 
Sbjct: 91  NTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKEAYVNANQ 150

Query: 669 LKHLEEPPNTSKRLHPSTKLKRSYDDTED 755
            +     P+TS   +  ++ KRSY+D +D
Sbjct: 151 AR---VSPSTS---YTPSRHKRSYEDDDD 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,541,472
Number of Sequences: 237096
Number of extensions: 1752520
Number of successful extensions: 3553
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3553
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)