Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00131X
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107862-1|AAI07863.1| 365|Homo sapiens SNX27 protein protein. 51 2e-06
BC101824-1|AAI01825.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
BC101822-1|AAI01823.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
BC101000-1|AAI01001.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
BC100999-1|AAI01000.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
BC100998-1|AAI00999.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
BC071825-1|AAH71825.1| 367|Homo sapiens SNX27 protein protein. 51 2e-06
AY044866-1|AAK97797.1| 435|Homo sapiens sorting nexin 27 protein. 51 2e-06
AL589765-6|CAI17169.1| 435|Homo sapiens sorting nexin family me... 51 2e-06
AL589765-2|CAI17165.1| 541|Homo sapiens sorting nexin family me... 51 2e-06
AL589765-1|CAI17164.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
AL391335-3|CAH73503.1| 435|Homo sapiens sorting nexin family me... 51 2e-06
AL391335-2|CAH73502.1| 541|Homo sapiens sorting nexin family me... 51 2e-06
AL391335-1|CAH73501.1| 528|Homo sapiens sorting nexin family me... 51 2e-06
AB007957-1|BAE16986.1| 523|Homo sapiens KIAA0488 protein. 51 2e-06
BC051817-1|AAH51817.1| 283|Homo sapiens SNX27 protein protein. 48 1e-05
D31764-1|BAA06542.2| 495|Homo sapiens KIAA0064 protein. 30 3.9
CR457081-1|CAG33362.1| 470|Homo sapiens SNX17 protein. 30 3.9
BT007167-1|AAP35831.1| 470|Homo sapiens sorting nexin 17 protein. 30 3.9
BC050590-1|AAH50590.1| 470|Homo sapiens sorting nexin 17 protein. 30 3.9
BC014620-1|AAH14620.1| 470|Homo sapiens sorting nexin 17 protein. 30 3.9
BC002610-1|AAH02610.1| 470|Homo sapiens sorting nexin 17 protein. 30 3.9
BC002524-1|AAH02524.1| 470|Homo sapiens sorting nexin 17 protein. 30 3.9
AK222543-1|BAD96263.1| 470|Homo sapiens sorting nexin 17 varian... 30 3.9
AJ404855-1|CAC12897.1| 470|Homo sapiens KIAA0064 protein protein. 30 3.9
AC074117-7|AAY14844.1| 470|Homo sapiens unknown protein. 30 3.9
>BC107862-1|AAI07863.1| 365|Homo sapiens SNX27 protein protein.
Length = 365
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 58 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 115
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 116 KKNSTTDQVYQAIAAKV 132
>BC101824-1|AAI01825.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>BC101822-1|AAI01823.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>BC101000-1|AAI01001.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>BC100999-1|AAI01000.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>BC100998-1|AAI00999.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>BC071825-1|AAH71825.1| 367|Homo sapiens SNX27 protein protein.
Length = 367
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 60 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 117
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 118 KKNSTTDQVYQAIAAKV 134
>AY044866-1|AAK97797.1| 435|Homo sapiens sorting nexin 27 protein.
Length = 435
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 141 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 198
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 199 KKNSTTDQVYQAIAAKV 215
>AL589765-6|CAI17169.1| 435|Homo sapiens sorting nexin family
member 27 protein.
Length = 435
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 141 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 198
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 199 KKNSTTDQVYQAIAAKV 215
>AL589765-2|CAI17165.1| 541|Homo sapiens sorting nexin family
member 27 protein.
Length = 541
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>AL589765-1|CAI17164.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>AL391335-3|CAH73503.1| 435|Homo sapiens sorting nexin family
member 27 protein.
Length = 435
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 141 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 198
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 199 KKNSTTDQVYQAIAAKV 215
>AL391335-2|CAH73502.1| 541|Homo sapiens sorting nexin family
member 27 protein.
Length = 541
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>AL391335-1|CAH73501.1| 528|Homo sapiens sorting nexin family
member 27 protein.
Length = 528
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 234 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 291
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 292 KKNSTTDQVYQAIAAKV 308
>AB007957-1|BAE16986.1| 523|Homo sapiens KIAA0488 protein.
Length = 523
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 ARRTKMHDDEQTLAGVRSALIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSV 373
ARR + + + + +R +I E + +QEFL++ D++ N + VEL+V LPD TV V
Sbjct: 229 ARRRGLEEYLEKVCSIR--VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRV 286
Query: 374 LRSTRADLVYRAVADKI 424
+++ D VY+A+A K+
Sbjct: 287 KKNSTTDQVYQAIAAKV 303
>BC051817-1|AAH51817.1| 283|Homo sapiens SNX27 protein protein.
Length = 283
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 254 LIAECESVQEFLTDCDDSSNP-APVELKVLLPDRDVATVSVLRSTRADLVYRAVADKI 424
+I E + +QEFL++ D++ N + VEL+V LPD TV V +++ D VY+A+A K+
Sbjct: 6 VIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKV 63
>D31764-1|BAA06542.2| 495|Homo sapiens KIAA0064 protein.
Length = 495
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 105 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 164
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 165 EDVLEAVAAKLDL 177
>CR457081-1|CAG33362.1| 470|Homo sapiens SNX17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>BT007167-1|AAP35831.1| 470|Homo sapiens sorting nexin 17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>BC050590-1|AAH50590.1| 470|Homo sapiens sorting nexin 17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>BC014620-1|AAH14620.1| 470|Homo sapiens sorting nexin 17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>BC002610-1|AAH02610.1| 470|Homo sapiens sorting nexin 17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>BC002524-1|AAH02524.1| 470|Homo sapiens sorting nexin 17 protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>AK222543-1|BAD96263.1| 470|Homo sapiens sorting nexin 17 variant
protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>AJ404855-1|CAC12897.1| 470|Homo sapiens KIAA0064 protein protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
>AC074117-7|AAY14844.1| 470|Homo sapiens unknown protein.
Length = 470
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 EQTLAGVRS-ALIAECESVQEFLTDCDDSSNPAPVE---LKVLLPDRDVATVSVLRSTRA 391
E+ + VR L+ E+ FL + P E L+VLL + V+VL S +
Sbjct: 80 EKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQT 139
Query: 392 DLVYRAVADKIRL 430
+ V AVA K+ L
Sbjct: 140 EDVLEAVAAKLDL 152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,403,990
Number of Sequences: 237096
Number of extensions: 954822
Number of successful extensions: 1924
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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