Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00131X
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-2|CAB02091.1|  578|Caenorhabditis elegans Hypothetical pr...    39   0.002
AF125959-5|AAD14734.2|  108|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z68114-5|CAA92155.1|  316|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z79754-2|CAB02091.1|  578|Caenorhabditis elegans Hypothetical
           protein F25H2.2 protein.
          Length = 578

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 19/59 (32%), Positives = 34/59 (57%)
 Frame = +2

Query: 254 LIAECESVQEFLTDCDDSSNPAPVELKVLLPDRDVATVSVLRSTRADLVYRAVADKIRL 430
           +IAE E VQ+FL +CD       VE++++LPD    T+   RS  + L + +   ++++
Sbjct: 257 VIAESELVQKFLMECDPM---CEVEIRLMLPDGSPITIRTRRSITSSLFFTSAQRRLKM 312


>AF125959-5|AAD14734.2|  108|Caenorhabditis elegans Hypothetical
           protein H23N18.5 protein.
          Length = 108

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -3

Query: 285 NSCTLSHSAISALRTPASVCSSS-CILVLRAEXSKSVLTFHCLRTTNGRKTLMVFKFR 115
           ++C   H+A  A +TP +VC    C     A  S  + TF      N  K+   F F+
Sbjct: 50  DACCAQHTACYAKKTPRNVCDEGFCKCAKNAAKSLPLCTFQMDTFCNTAKSFGGFHFK 107


>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical
           protein ZK930.1 protein.
          Length = 1354

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -3

Query: 162 LRTTNGRKTLMVFKFRNTLSCRVHEAAVERLFTRVVRSTTGKGCILIKLTI 10
           L TTN  + L V  + N LSC   E      F +V R  T +G  + K+ +
Sbjct: 7   LFTTNPSEILPVEVYLNDLSCDAVENLGSTRFMKVARGRTHEGVFVYKVFV 57


>Z68114-5|CAA92155.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.7 protein.
          Length = 316

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 53  RTTLVNKRSTAASCTRQ--LKVFLNLKTINVFLPLV 154
           + TL N  S   S T++  +K F+N  T+ VFLPL+
Sbjct: 206 KKTLRNINSNKFSITKKALIKGFINGVTLQVFLPLI 241


>Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical
           protein ZK1307.7 protein.
          Length = 436

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -3

Query: 306 LSSQSVRNSCTLSHSAISALRTPASVCSSSCILVLRAEXSKSVLTF--HCLRT 154
           L S+++R   TLS   +S L   AS C     LV  A     +L +  +C+ T
Sbjct: 299 LLSENIRPLYTLSSDLVSLLTVVASACRLPIYLVCNARIRCEILDYVDNCVLT 351


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,056,447
Number of Sequences: 27780
Number of extensions: 148073
Number of successful extensions: 399
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)