Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00130
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.0  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    24   5.3  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    23   7.0  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 164 SQCPSFHMGLPYSQFRYRTNTESPVTLFWA*RTRRER 274
           SQCP      P + FRY    ++P T FW   T  +R
Sbjct: 398 SQCPIS----PGTTFRYTFRADNPGTHFWHSHTGMQR 430


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 425  ANWNSTVDGTKVIFSYLSKDGEEGYPGD 508
            A W+  +DG       L  D ++GYPG+
Sbjct: 1806 AGWDGVLDGIINEEDCLPPDNDKGYPGN 1833


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +2

Query: 410 NGFNKANWNSTVDG--TKVIFSYLSK 481
           N FN ANW +  D   +K + SYL K
Sbjct: 648 NAFNTANWQAIADALQSKNVPSYLMK 673


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +3

Query: 204 NSGTGQIRNHQ*RCSGLDELDG---NVNRNTPHLGTTVGRCANRIGGQISVSTARLIN 368
           N+    + NHQ + S ++E  G   N N N  + G+  G   N      ++S + ++N
Sbjct: 74  NNNNNGVGNHQQQPSPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLN 131


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 197 YSQFRYRTNTESPVTLFWA*RTRREREQKHTALR 298
           Y Q   R NT++P    W    ++ +E + TA++
Sbjct: 330 YQQLEERGNTDNPDVARWLEWRKKIKEYRMTAMK 363


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 275 HVPVEFVKPRTTSLVIPYLSGT*IDCM 195
           H PV  V      LV  YL+G  + CM
Sbjct: 120 HFPVSTVAGHVGRLVFGYLAGVPVMCM 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,830
Number of Sequences: 2352
Number of extensions: 15535
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)