Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00130
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17940.1 68416.m02284 aldose 1-epimerase family protein simil... 51 6e-07
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 50 2e-06
At3g47800.1 68416.m05207 aldose 1-epimerase family protein simil... 49 3e-06
At5g63190.2 68418.m07934 MA3 domain-containing protein low simil... 31 0.73
At5g63190.1 68418.m07933 MA3 domain-containing protein low simil... 31 0.73
At3g03880.1 68416.m00401 expressed protein 31 0.73
At1g61400.1 68414.m06919 S-locus protein kinase, putative simila... 30 1.7
At3g48390.1 68416.m05282 MA3 domain-containing protein similar t... 29 2.9
At3g17480.1 68416.m02233 F-box family protein contains F-box dom... 29 2.9
At2g23000.1 68415.m02743 serine carboxypeptidase S10 family prot... 29 2.9
At4g17570.1 68417.m02627 zinc finger (GATA type) family protein 28 5.1
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 28 6.8
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 28 6.8
At5g25900.1 68418.m03075 ent-kaurene oxidase, putative (GA3) / c... 27 9.0
At4g23180.1 68417.m03344 receptor-like protein kinase 4, putativ... 27 9.0
>At3g17940.1 68416.m02284 aldose 1-epimerase family protein similar
to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149]
from [Acinetobacter calcoaceticus]; contains Pfam
profile PF01263 Aldose 1-epimerase
Length = 341
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 341 FSIDGTTYQLANNIGKDHLHGGINGFNKANW---NSTVDGTK--VIFSYLSKDGEEGYPG 505
FS++G Y L N + LHGG GF+K W DG K + F Y S DGEEGYPG
Sbjct: 79 FSLNGVNYTLPINKPPNSLHGGNKGFDKKIWEVAGHKRDGEKPFITFKYHSADGEEGYPG 138
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 169 VSVISYGATIQSIQVPDKYGITSDVVLG 252
V + +YG TI S+ VPDK G DVVLG
Sbjct: 21 VKISNYGTTITSLSVPDKNGKLGDVVLG 48
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 499 PG*FITNITYEVTEDNALHVDFMSXXXXXXXXXXXX-HSYFNLAGHETGVQEIYNHIFVI 675
PG TY +T + +D + H+Y+NLAGH++G I +H I
Sbjct: 137 PGAVSVTATYTLTSATTMRLDMEAVPENKDTPINLAQHTYWNLAGHDSG--NILDHKIQI 194
Query: 676 NADKIT 693
IT
Sbjct: 195 WGSHIT 200
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 249 GLDELDGNVNRNTPHLGTTVGRCANRI 329
G D +D V P+ G VGR ANRI
Sbjct: 48 GFDSVDPYVKGLAPYFGCIVGRVANRI 74
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = +2
Query: 341 FSIDGTTYQLANNIGKDHLHGGINGFNKANW---NSTVDGTK--VIFSYLSKDGEEGYPG 505
F ++G Y+ + N GK+ LHGG GF W DG K ++F++ S DG++G+PG
Sbjct: 229 FKLNGKEYKTSVNDGKNTLHGGKKGFGDVVWAVAKHQYDGKKPHIVFTHTSPDGDQGFPG 288
Query: 506 D 508
+
Sbjct: 289 E 289
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 499 PG*FITNITYEVTEDNALHVDFMSXXXXXXXXXXXXH-SYFNLAGHETG 642
PG +TY++ +DN L V + H SY+NL GH +G
Sbjct: 287 PGELSVTVTYKLVKDNELSVVMEAKPKDKATPVNLAHHSYWNLGGHNSG 335
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 166 SVSVISYGATIQSIQVPDKYGITSDVVLG 252
+V ++GA+I S+ PDK G D+VLG
Sbjct: 171 TVKFTNWGASIISLHFPDKNGKMDDIVLG 199
>At3g47800.1 68416.m05207 aldose 1-epimerase family protein similar
to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149]
from [Acinetobacter calcoaceticus]; contains Pfam
profile PF01263 Aldose 1-epimerase
Length = 358
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 341 FSIDGTTYQLANNIGKDHLHGGINGFNKANWN--STVDGTKVIFSYLSKDGEEGYPGD 508
F ++G Y+ N G++ LHGG GF+ W+ V + + F+Y S DGEEG+PG+
Sbjct: 100 FKLNGHLYKTDPNEGRNTLHGGSKGFSDVIWSVQKYVPTSHITFTYDSFDGEEGFPGN 157
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +1
Query: 142 TWRASDG-FSVSVISYGATIQSIQVPDKYGITSDVVLG 252
T++ + G SV+ +YGA + S+ +PD++G DVVLG
Sbjct: 33 TYKLTRGSLSVTFTNYGAVMTSLLLPDRHGKQDDVVLG 70
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 249 GLDELDGNVNRNTPHLGTTVGRCANRIGG 335
G D +DG N +T + G VGR ANRIGG
Sbjct: 70 GFDTVDGYKN-DTTYFGAIVGRVANRIGG 97
>At5g63190.2 68418.m07934 MA3 domain-containing protein low
similarity to programmed cell death 4 protein [Gallus
gallus] GI:12958564; contains Pfam profile PF02847: MA3
domain
Length = 702
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 430 IRLIKSVNPAM*MIFP--NVVSELISRAVDTEICPPILLAQRPTVVPK 293
IRL++SV+ I NV++ I+RA+ EI PP+ L + ++P+
Sbjct: 200 IRLLRSVDDLAVDILDAVNVLALFIARAIVDEILPPVFLVRSKKILPE 247
>At5g63190.1 68418.m07933 MA3 domain-containing protein low
similarity to programmed cell death 4 protein [Gallus
gallus] GI:12958564; contains Pfam profile PF02847: MA3
domain
Length = 702
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 430 IRLIKSVNPAM*MIFP--NVVSELISRAVDTEICPPILLAQRPTVVPK 293
IRL++SV+ I NV++ I+RA+ EI PP+ L + ++P+
Sbjct: 200 IRLLRSVDDLAVDILDAVNVLALFIARAIVDEILPPVFLVRSKKILPE 247
>At3g03880.1 68416.m00401 expressed protein
Length = 193
Score = 31.1 bits (67), Expect = 0.73
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 287 TALRDHGRPLCQQDRRTNFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIF 466
+ L D RP +++ R TT + +NIGKD L G ING + N ++ K+
Sbjct: 62 SGLPDRRRPSPEKEERYY-----TTRGVVDNIGKDCLDGNINGEDSNNKEESM-WPKLFI 115
Query: 467 SYLSKDGEEGY 499
+ +K+ EE +
Sbjct: 116 TLSNKEKEEDF 126
>At1g61400.1 68414.m06919 S-locus protein kinase, putative similar
to KI domain interacting kinase 1 [Zea mays]
gi|2735017|gb|AAB93834; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 821
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/84 (22%), Positives = 29/84 (34%)
Frame = +2
Query: 245 FWA*RTRREREQKHTALRDHGRPLCQQDRRTNFSIDGTTYQLANNIGKDHLHGGINGFNK 424
FW R + + L+ P + + L+N +G HGG K
Sbjct: 457 FWRRRVEQNEDAWRNDLQTQDVPGLEYFEMNTIQTATNNFSLSNKLG----HGGFGSVYK 512
Query: 425 ANWNSTVDGTKVIFSYLSKDGEEG 496
A DG ++ LS E+G
Sbjct: 513 ARNGKLQDGREIAVKRLSSSSEQG 536
>At3g48390.1 68416.m05282 MA3 domain-containing protein similar to
programmed cell death 4 protein [Gallus gallus]
GI:12958564; contains Pfam profile PF02847: MA3 domain
Length = 633
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 430 IRLIKSVNPAM*MI--FPNVVSELISRAVDTEICPPILLAQRPTVVP 296
IRL++SV I NV++ I+RA+ EI PP+ LA+ +P
Sbjct: 134 IRLLESVGDLALDIPDAVNVLALFIARAIVDEILPPVFLARAKKTLP 180
>At3g17480.1 68416.m02233 F-box family protein contains F-box domain
Pfam:PF00646
Length = 373
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 684 VSVYNKDMVVDLLDTSFVASQIKIRMVCQIYNGLFSCRR 568
+SV +D+V D+L S +++R C+ +N + + RR
Sbjct: 8 MSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRR 46
>At2g23000.1 68415.m02743 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 609 MVCQIYNGLFSCRRHKVDMQGIVLGNFIS 523
+V +I G + C +H +++QG VLGN I+
Sbjct: 184 LVQEISKGNYICCKHLINLQGYVLGNPIT 212
>At4g17570.1 68417.m02627 zinc finger (GATA type) family protein
Length = 510
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 257 RTRREREQKHTALRDHGRPLCQQDRRTNFSID 352
RT+ + E+ H L HG PLC D + F+ D
Sbjct: 270 RTKSQTERVHV-LGSHGSPLCSIDLKDVFNFD 300
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 130 PSLHDAVQNPQHSKSPCLLFKTNDSSGHKQLRKQSY 23
PS H+ + N H P LL +TN + +L QS+
Sbjct: 198 PSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSF 233
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 130 PSLHDAVQNPQHSKSPCLLFKTNDSSGHKQLRKQSY 23
PS H+ + N H P LL +TN + +L QS+
Sbjct: 198 PSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSF 233
>At5g25900.1 68418.m03075 ent-kaurene oxidase, putative (GA3) /
cytochrome P450 identical to GA3 [Arabidopsis thaliana]
GI:3342249; similar to ent-kaurene oxidase [Cucurbita
maxima] GI:11934675; contains Pfam profile PF00067:
Cytochrome P450
Length = 509
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 121 GETVSKFTWRASDGFSVSVISYGATIQSI 207
G V +F W+ DG +V +YG T Q +
Sbjct: 469 GRLVQEFEWKLRDGEEENVDTYGLTSQKL 497
>At4g23180.1 68417.m03344 receptor-like protein kinase 4, putative
(RLK4) nearly identical to receptor-like protein kinase
4 [Arabidopsis thaliana] GI:13506745; contains Pfam
domain, PF00069: Protein kinase domain; identical to
cDNA receptor-like protein kinase 4 (RLK4) GI:13506744
Length = 669
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 260 TRREREQKHTALRDHGRPLCQQDRRTNFSIDGTTYQLANNIGKDHLHGGINGFNKANWNS 439
TRR R+ +T G + D + +D T Q A + + G GF + +
Sbjct: 310 TRRARKSYYTPSAFAGDDITTAD---SLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGT 366
Query: 440 TVDGTKVIFSYLSKDGEEG 496
DGT+V LSK +G
Sbjct: 367 LSDGTEVAVKRLSKSSGQG 385
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,684
Number of Sequences: 28952
Number of extensions: 329915
Number of successful extensions: 837
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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