Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00128
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-li...    87   1e-17
AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical ...    87   1e-17
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei...    30   1.9  
Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical...    28   7.6  

>AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-like
           protein protein.
          Length = 311

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = +2

Query: 248 LQKTQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELY 427
           L   QL+    NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY
Sbjct: 73  LATAQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELY 132

Query: 428 KELTLPHLEKEQFNLQWVYNILEGKSE 508
           + +T P++EK Q NL WVYN LE +SE
Sbjct: 133 ETVTRPYIEKYQLNLNWVYNCLEKRSE 159



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/44 (47%), Positives = 31/44 (70%)
 Frame = +1

Query: 511 DRIVHDNKSEKEGFVLLPDLKWDGLTQETLYLLAIVRQRDIKAL 642
           D+IV ++   + GFVLL D+KWDG T E LY+LAI  +  +K++
Sbjct: 161 DKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGLKSV 204


>AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical
           protein Y113G7A.9 protein.
          Length = 311

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = +2

Query: 248 LQKTQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELY 427
           L   QL+    NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY
Sbjct: 73  LATAQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELY 132

Query: 428 KELTLPHLEKEQFNLQWVYNILEGKSE 508
           + +T P++EK Q NL WVYN LE +SE
Sbjct: 133 ETVTRPYIEKYQLNLNWVYNCLEKRSE 159



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/44 (47%), Positives = 31/44 (70%)
 Frame = +1

Query: 511 DRIVHDNKSEKEGFVLLPDLKWDGLTQETLYLLAIVRQRDIKAL 642
           D+IV ++   + GFVLL D+KWDG T E LY+LAI  +  +K++
Sbjct: 161 DKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGLKSV 204


>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
            protein.
          Length = 1198

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 618  QTKRHKSLRDLDEQHLPLLKRIRDEGKKP 704
            Q K  K L  ++E+ L  LKR++ EGKKP
Sbjct: 1056 QEKARKYLDWINEEQLNELKRLKSEGKKP 1084


>Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical
           protein F58G1.7 protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
 Frame = -1

Query: 671 QW*MLLVQISKAFMSLCLTIANKYNVSWVRPSHFRSGRSTNPSFSLLLSCTILSAHFYLL 492
           Q+   L  +S AF+ L   I     V+     HF+ G   +  +    + T LS   + +
Sbjct: 14  QYVQQLPLLSLAFLPLISAIFGLKYVNLKSVIHFQQGTLGSSPWRAATTMTFLSTPIFFI 73

Query: 491 EC-CTPTAN*TVLSRDEAMSVLYIAL-ESPVQYEL 393
            C C PT +        ++++L  AL  SP+ + L
Sbjct: 74  WCLCVPTPSAIFFQVGASLALLLTALTSSPILHYL 108


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +2

Query: 257 TQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKEL 436
           T++K   E  +Y +   FP  TI+           DKHIA F+     ++L + E   E 
Sbjct: 289 TKIKKIKEGSVYSSIPIFPGGTIS-----------DKHIAAFTDGAAAVILASQEAVSEQ 337

Query: 437 TLPHLEK 457
            L  L +
Sbjct: 338 NLKPLAR 344


>Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical
           protein C08B11.8 protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -1

Query: 707 KWFLSLVSNPL*QW*MLLVQISKAFMSLCLTIANKYNVSWVRPSHFRSGRSTNPSFSLLL 528
           +W+L+   N L  W +    I+     L   I+NK N  WV  +  R   S      + L
Sbjct: 97  QWYLNGTHNDLLYWGLDYPPITAYHHYLLGVISNKINKKWVELTTSRGYESIAHKLFMRL 156

Query: 527 SCTILSAHFYL 495
           S  I    FYL
Sbjct: 157 SAIIPFYIFYL 167


>AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical
           protein F57H12.4 protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 409 QYNMNFLLAKFSNMLISGWVDYCSFHTVYSR-RRETLEVSVNIVLEKRFQLSFLE 248
           Q   N ++  F  + I G V       V++R R+ +LEV    +LEKR   SFL+
Sbjct: 16  QNRQNIIIFPFETVCIPGIVAAVLSAIVFARLRQSSLEVDEWSILEKRIYNSFLK 70


>Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 647 ISKAFMSLCLTIANKYNVSWVRPSHFRSGRSTNPSFSLLLSCTILSAHFYLLE 489
           IS   M+  LT      +S +   ++R  R   P + L +  T++SAHF+L E
Sbjct: 39  ISGFLMARNLTHVKITKISQIFGFYYRRFRRILPLYYLSIVVTLVSAHFWLRE 91


>AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 647 ISKAFMSLCLTIANKYNVSWVRPSHFRSGRSTNPSFSLLLSCTILSAHFYLLE 489
           IS   M+  LT      +S +   ++R  R   P + L +  T++SAHF+L E
Sbjct: 39  ISGFLMARNLTHVKITKISQIFGFYYRRFRRILPLYYLSIVVTLVSAHFWLRE 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,700
Number of Sequences: 27780
Number of extensions: 341192
Number of successful extensions: 871
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)