Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00127
         (434 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0666 + 26561185-26561285,26561391-26561743,26562360-265623...    27   6.6  
02_04_0373 - 22453074-22453358,22453590-22453715                       27   6.6  

>03_05_0666 +
           26561185-26561285,26561391-26561743,26562360-26562361,
           26562687-26563146,26572609-26572973
          Length = 426

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 385 WPHQGFRFVRPP*FVYL*VAAMPLADLLTYQSRNFY*RVDVVSRCR 248
           WP QGF+  R P + +  V  +P    +T Q+R+ +   ++ S+ R
Sbjct: 369 WPSQGFKNRRGPGYRHPAVRRLPAVTAVTAQNRDKFTNRNLNSKIR 414


>02_04_0373 - 22453074-22453358,22453590-22453715
          Length = 136

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 161 GRSGRGVFGKLFSKKQHKERDERATE 238
           GR  RGV G     KQ +E DER  E
Sbjct: 83  GRGERGVDGLWSGGKQRREHDERGVE 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,456
Number of Sequences: 37544
Number of extensions: 245764
Number of successful extensions: 580
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)