Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00126
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0058 + 18719852-18719929,18720032-18720889,18720969-187211...    30   2.5  
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529...    29   4.4  
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406...    29   4.4  
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298     28   7.6  

>11_05_0058 +
           18719852-18719929,18720032-18720889,18720969-18721118,
           18722248-18722496,18722531-18722575,18722576-18722638
          Length = 480

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 190 SGVQFAQRRHTELRHYELRREHKGILQVPDRGFDGCMRQISINGVKLDLSENLESI 357
           +G  +   + T+LR  E R  HK +      GFDG    I +    L+ S NLE +
Sbjct: 365 NGSLYYPGKKTDLRRLEKREPHKNLKFAKMTGFDGERSSIELALHILESSTNLECL 420


>11_06_0676 +
           26152192-26152367,26152669-26152708,26152857-26152966,
           26153886-26153934,26154157-26154206,26154606-26155150,
           26155583-26155743,26156231-26156440,26156525-26156690,
           26156765-26156869,26157465-26157760
          Length = 635

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +1

Query: 301 RQISINGVKLDLSENLESIGMAYGCQFASLVSFNGTDSYLRFVDVTSENPQLTLKFK 471
           +Q ++N +K    + L+SIG  +  +    V     D+Y+ F+D     P L + F+
Sbjct: 446 QQDAVNRLKKQAYDELDSIGFDHEMKNNYPVMTLSDDAYIPFIDTAQNPPDLHVTFQ 502


>08_01_0461 -
           4063614-4064375,4064439-4066017,4066041-4066086,
           4066416-4066933,4067435-4067694,4068089-4068594,
           4068667-4071319
          Length = 2107

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 531 PDSISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFSTDT 710
           PD +S  + N    V+S R     G+N     +W VL +THN  +L++   +  + +  T
Sbjct: 626 PDVLSQQVANKCDAVISIR-----GINVTVPVKWFVLALTHNEESLRIDAAESLFLNPKT 680

Query: 711 APPP 722
           +  P
Sbjct: 681 SSLP 684


>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
          Length = 439

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 93  AQPEHTMMVNGINWTLAGSLPSAL*PWTTRCSKRSPIRPAPTY 221
           +QP H        WTL GSL +     +TR   R P+R  P +
Sbjct: 54  SQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPRPPVRRPPVH 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,988,339
Number of Sequences: 37544
Number of extensions: 496165
Number of successful extensions: 1373
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)