Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00125
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.076
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    26   0.31 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.71 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   6.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.076
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 673 YGSFQLFNKILLLM*RTGYCIYFHALLVCPCCILLLHFYF 792
           Y +F LF   LLL+    Y  Y H L  C   I  +H  F
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLF 281



 Score = 25.0 bits (52), Expect = 0.71
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = +1

Query: 691 FNKILLLM*RTGYCIYFHALLVCPCCILLLHF-----YFY 795
           FN  LL +  +GY    H L  CP  I  +HF     YFY
Sbjct: 66  FNVHLLFLLCSGY-FTVHLLFYCPFIIFTVHFLLCTYYFY 104



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 742 HALLVCPCCILLLHFYFY 795
           H L  C   ILL  +YFY
Sbjct: 225 HLLFYCVLIILLCIYYFY 242


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 428 VLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFPPVPLWLVKSP 264
           VL + M  +EP    P++     PGP      F  +N LP    PP+PL  + +P
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +2

Query: 296 ESPSTAISLKTR---ISPLSTLDLASSPWLMPV 385
           ESP  A  L  R   I  +ST+DL SS W +P+
Sbjct: 373 ESPPAADELLRRFHEIRYMSTIDLRSSYWQIPL 405


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 167 TCENFRALCTGEK 205
           T ++FR LCTG K
Sbjct: 408 TLDDFRGLCTGNK 420


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 428 VLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFPPVPL 282
           VL + M  +EP    P++     PGP      F  +N  P    PP+PL
Sbjct: 143 VLNLTMPKYEP---NPSII---DPGPALPPTGFLCNNYPPLPQVPPLPL 185


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 199 ASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDVE-EY 89
           A   G    ++L + + S   + FSQWG    D++ EY
Sbjct: 110 AILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEY 147


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 523 FPDWLQRSQSA*QLPCLQQHSQRQHVC 443
           + DW   +    Q  C+Q  +Q Q +C
Sbjct: 99  YVDWCSTNPCENQATCVQNKNQYQCLC 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,898
Number of Sequences: 336
Number of extensions: 4768
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)