Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00124X
(524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1667 + 28484069-28484071,28484151-28484240,28484339-284844... 109 1e-24
05_01_0401 + 3169979-3169981,3170071-3170160,3170556-3170684,317... 105 3e-23
03_02_0954 - 12687373-12687582,12688885-12689067,12689160-126892... 88 4e-18
07_01_0755 - 5806614-5806939,5807039-5809415 29 2.3
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 29 2.3
11_01_0520 + 4078075-4078198,4078726-4078957,4079068-4079147,407... 28 4.0
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356 28 5.3
11_01_0572 + 4565353-4565535,4566856-4567095,4567922-4568086,456... 28 5.3
09_04_0365 - 16962608-16963174,16963301-16963486,16963824-169638... 27 7.0
03_02_1002 + 13124398-13124994,13125116-13125346,13125993-131262... 27 7.0
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797 27 7.0
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 27 9.2
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 27 9.2
02_05_0718 + 31203358-31203717,31203826-31204011 27 9.2
>07_03_1667 +
28484069-28484071,28484151-28484240,28484339-28484491,
28484575-28484757,28486137-28486295
Length = 195
Score = 109 bits (262), Expect = 1e-24
Identities = 57/97 (58%), Positives = 68/97 (70%)
Frame = +2
Query: 233 PHEEANS*GLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 412
P A S IAV+VGTVT+D R+Y++P M VAAL TE ARARI+ AGGE LTFDQLAL
Sbjct: 76 PDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARIINAGGECLTFDQLAL 135
Query: 413 RAPTGKKTVLVQGQRNAREADASLWPCSRSSASHTKP 523
RAP G+ TVL++G +NAREA P S+TKP
Sbjct: 136 RAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKP 172
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 30 MGID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 206
MGID + ++K +RT +S+D+ T + FN ++L+RLFMS+ NRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP 60
Query: 207 PISVSRLARHMK 242
P+S+ RL R M+
Sbjct: 61 PLSMRRLVRFME 72
>05_01_0401 +
3169979-3169981,3170071-3170160,3170556-3170684,
3170814-3170999,3172001-3172159
Length = 188
Score = 105 bits (251), Expect = 3e-23
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = +2
Query: 263 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 442
IAV+VGTVT+D R+ +IPKM V AL TE ARARI+ AGGE LTFDQLALRAP G+ TVL
Sbjct: 79 IAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGECLTFDQLALRAPLGENTVL 138
Query: 443 VQGQRNAREADASLWPCSRSSASHTKP 523
++G +NAREA SHTKP
Sbjct: 139 LRGPKNAREAVRHFGKAPGVPHSHTKP 165
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 30 MGID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 206
MGID + ++K +RT +S D+ T + FN ++L+RLFMS+ NRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 60
Query: 207 PISVSRLARHMK 242
P+S+ RLA+ M+
Sbjct: 61 PLSLRRLAKFME 72
>03_02_0954 -
12687373-12687582,12688885-12689067,12689160-12689288,
12689375-12689464,12689548-12689550
Length = 204
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/104 (50%), Positives = 64/104 (61%), Gaps = 17/104 (16%)
Frame = +2
Query: 263 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKT-- 436
IAV+VGTVT+D R+Y++P M VAAL TE ARARI+ GGE LTFDQLALRAP G+ T
Sbjct: 78 IAVIVGTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECLTFDQLALRAPLGQNTYI 137
Query: 437 ---------------VLVQGQRNAREADASLWPCSRSSASHTKP 523
VL++G +NAREA P S+TKP
Sbjct: 138 AMPEILTIDNFALLQVLLRGPKNAREAVKHFGPAPGVPHSNTKP 181
Score = 57.6 bits (133), Expect = 6e-09
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 30 MGID-INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 206
MGID + ++K +RT KS D+ T + FN ++LRRLFMS+ NRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRP 60
Query: 207 PISVSRLARHMK 242
P+S+ RL R M+
Sbjct: 61 PLSLRRLVRFME 72
>07_01_0755 - 5806614-5806939,5807039-5809415
Length = 900
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 361 CTSFFGNMKS-SHRHLRYLVQSHVICDCPHYHGNQTLRVGFFMWRAKRDTEIGGRL 197
C +G+ HR + Y V V+ C +L V FMWR +++ E ++
Sbjct: 525 CGPIYGSSYGMDHRKISYRVALAVVGSCVLIFSVVSLVVALFMWRERQEKEAEAKM 580
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 402 SWLFVLRLARRQYWYKVSEMLVRQMR-HFGPAPGAARLTLNP 524
SW V L + Q+WY VS+ L + F G + LNP
Sbjct: 199 SWADVELLKKHQHWYNVSKTLAEKAAWDFAAKEGLQLVALNP 240
>11_01_0520 +
4078075-4078198,4078726-4078957,4079068-4079147,
4079256-4079409,4079438-4079494,4080733-4080811,
4081013-4081094,4081168-4081223,4081310-4081492
Length = 348
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 376 SSQNACTSFFGNMKSSHRHLRYLVQSHVICDCP 278
SS ++ SF + SS+RHL L+ + + CP
Sbjct: 96 SSLDSVRSFAKSFNSSYRHLNVLINNAGVMSCP 128
>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
Length = 480
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 381 PPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPYELASSCGA 229
P + RAR+ S+T A +V F + T TTTA K SS A
Sbjct: 293 PRPSHRRARSMSITGSAKSVRFPFTRQASRSTTTTTTTAFKVIRSRSSRAA 343
>11_01_0572 +
4565353-4565535,4566856-4567095,4567922-4568086,
4568612-4568887
Length = 287
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 390 LLLISWLFVLRLARRQYWYKVSEML 464
LL+++WLFV+ RR W +V E+L
Sbjct: 143 LLVLAWLFVIDFGRR-VWGEVDELL 166
>09_04_0365 - 16962608-16963174,16963301-16963486,16963824-16963896,
16964307-16964497,16964982-16965198,16965394-16965797,
16966593-16966658,16966668-16966721,16966945-16967079,
16967194-16967391,16967734-16967918,16968990-16969527
Length = 937
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 334 SSHRHLRYLVQSHVICDCPHYHGNQTLRVGFFMWRAKRDTEIG 206
+S L ++ + C +H + +V FFMW A+R+ G
Sbjct: 875 ASAYELFFMANTEARCGSLIWHTREPSKVKFFMWLAEREVSHG 917
>03_02_1002 +
13124398-13124994,13125116-13125346,13125993-13126282,
13126405-13126498
Length = 403
Score = 27.5 bits (58), Expect = 7.0
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 335 EQPPSSSVSCTVSRHL*LSPL-PRQSNPTSWLLHVARQTRHRDWWPVDTAHKEPA*NDLI 159
EQPP+SS +S + +S L P SN +S + QT + P+ K P
Sbjct: 299 EQPPASSAEACISSFVQMSELCPSMSNGSS--MEETHQTNPGNGTPMQVLPKMP------ 350
Query: 158 EFGICTSGQVSVKLYK 111
EF C + + YK
Sbjct: 351 EFVPCPDRNLVISRYK 366
>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
Length = 518
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 412
++G++ DV I + VAA+ V + R + GG +L Q+A+
Sbjct: 329 ILGSIITDV--VSISSVAVAAVVVDRRGRRTLFMVGGAVLILCQVAM 373
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 STPALYEPYQPATNLCV-SFGAPHEEANS 253
S PA ++ Y+P+TNL + S+ P+ A+S
Sbjct: 701 SVPAYFQQYEPSTNLILPSYLLPYAAASS 729
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 309 LYSLTSFVTVPTTTAIKPYELASSCGAPNETQR 211
LYS + F+T+ T +K ++L S +PN T R
Sbjct: 138 LYSNSFFMTLTDETRVKEFKLKSMWRSPNGTIR 170
>02_05_0718 + 31203358-31203717,31203826-31204011
Length = 181
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 256 GFDCRGSGDSHK*RETVQDTEDDGGCSSCYRK 351
G D GSGD K R D +DDG Y+K
Sbjct: 122 GDDDDGSGDERKPRYKKHDDDDDGERKPRYKK 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,448,387
Number of Sequences: 37544
Number of extensions: 336333
Number of successful extensions: 928
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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