Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00124X
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 96 8e-20
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 96 8e-20
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 96 8e-20
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 96 8e-20
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 96 8e-20
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 96 8e-20
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 33 0.46
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 33 0.46
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 32 1.4
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 32 1.4
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 32 1.4
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 32 1.4
BC088365-1|AAH88365.2| 435|Homo sapiens PTD016 protein protein. 30 4.3
AK098649-1|BAC05364.1| 252|Homo sapiens protein ( Homo sapiens ... 30 4.3
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKP 165
Score = 86.6 bits (205), Expect = 5e-17
Identities = 42/75 (56%), Positives = 49/75 (65%)
Frame = +3
Query: 30 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 209
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 210 ISVSRLARHMKKPTR 254
+S+SR+ R MK P R
Sbjct: 61 LSLSRMIRKMKLPGR 75
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 57 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 116
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 117 SGPRKGREVYRHFGKAPGTPHSHTKP 142
Score = 57.6 bits (133), Expect = 2e-08
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +3
Query: 144 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTR 254
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P R
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGR 52
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKP 165
Score = 84.6 bits (200), Expect = 2e-16
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +3
Query: 30 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 209
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 210 ISVSRLARHMKKPTR 254
+ +SR+ R MK P R
Sbjct: 61 LCLSRMIRKMKLPGR 75
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKP 165
Score = 86.6 bits (205), Expect = 5e-17
Identities = 42/75 (56%), Positives = 49/75 (65%)
Frame = +3
Query: 30 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 209
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 210 ISVSRLARHMKKPTR 254
+S+SR+ R MK P R
Sbjct: 61 LSLSRMIRKMKLPGR 75
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKP 165
Score = 86.6 bits (205), Expect = 5e-17
Identities = 42/75 (56%), Positives = 49/75 (65%)
Frame = +3
Query: 30 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 209
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 210 ISVSRLARHMKKPTR 254
+S+SR+ R MK P R
Sbjct: 61 LSLSRMIRKMKLPGR 75
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 95.9 bits (228), Expect = 8e-20
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2
Query: 266 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 445
AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+
Sbjct: 80 AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLL 139
Query: 446 QGQRNAREADASLWPCSRSSASHTKP 523
G R RE + SHTKP
Sbjct: 140 SGPRKGREVYRHFGKAPGTPHSHTKP 165
Score = 86.6 bits (205), Expect = 5e-17
Identities = 42/75 (56%), Positives = 49/75 (65%)
Frame = +3
Query: 30 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 209
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 210 ISVSRLARHMKKPTR 254
+S+SR+ R MK P R
Sbjct: 61 LSLSRMIRKMKLPGR 75
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +1
Query: 265 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCSDWQEDSTG 444
CR SG S R CS +S T CW + F +SCS W S+G
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF----TSCSCW---SSG 82
Query: 445 TRSAKCS 465
T S CS
Sbjct: 83 TSSTPCS 89
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +1
Query: 265 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCSDWQEDSTG 444
CR SG S R CS +S T CW + F +SCS W S+G
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF----TSCSCW---SSG 82
Query: 445 TRSAKCS 465
T S CS
Sbjct: 83 TSSTPCS 89
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 SQLVGFDCRG-SGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCS 420
S+ + DC G S + + E + T G C++C + H R N + +CS
Sbjct: 337 SECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACS 396
Query: 421 DWQEDSTGTRSAKC-S*GRC 477
G+ S +C S GRC
Sbjct: 397 SCHCSPVGSLSTQCDSYGRC 416
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 SQLVGFDCRG-SGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCS 420
S+ + DC G S + + E + T G C++C + H R N + +CS
Sbjct: 337 SECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACS 396
Query: 421 DWQEDSTGTRSAKC-S*GRC 477
G+ S +C S GRC
Sbjct: 397 SCHCSPVGSLSTQCDSYGRC 416
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 SQLVGFDCRG-SGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCS 420
S+ + DC G S + + E + T G C++C + H R N + +CS
Sbjct: 337 SECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACS 396
Query: 421 DWQEDSTGTRSAKC-S*GRC 477
G+ S +C S GRC
Sbjct: 397 SCHCSPVGSLSTQCDSYGRC 416
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 244 SQLVGFDCRG-SGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCS 420
S+ + DC G S + + E + T G C++C + H R N + +CS
Sbjct: 337 SECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACS 396
Query: 421 DWQEDSTGTRSAKC-S*GRC 477
G+ S +C S GRC
Sbjct: 397 SCHCSPVGSLSTQCDSYGRC 416
>BC088365-1|AAH88365.2| 435|Homo sapiens PTD016 protein protein.
Length = 435
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 366 FWLLEEKFLLLISWLFVLRLARRQYWYKVSEMLVRQMRHFGPAP 497
F+ + K L+L+ F++ + YWY + E L + R F P P
Sbjct: 260 FFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIP 303
>AK098649-1|BAC05364.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ25783 fis, clone TST06726. ).
Length = 252
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 366 FWLLEEKFLLLISWLFVLRLARRQYWYKVSEMLVRQMRHFGPAP 497
F+ + K L+L+ F++ + YWY + E L + R F P P
Sbjct: 77 FFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIP 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,062,702
Number of Sequences: 237096
Number of extensions: 1836639
Number of successful extensions: 8022
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8016
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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