Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00123
         (832 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2NFT3 Cluster: Hypothetical membrane-spanning protein;...    36   1.2  
UniRef50_A4RU77 Cluster: Predicted protein; n=2; Ostreococcus|Re...    36   1.6  
UniRef50_Q8NFX7 Cluster: Syntaxin-binding protein 6; n=20; Eutel...    35   2.2  
UniRef50_Q54BD1 Cluster: Kinase motif-containing (KMC) protein; ...    33   8.8  
UniRef50_Q22AL8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  
UniRef50_A7S6D0 Cluster: Predicted protein; n=1; Nematostella ve...    33   8.8  
UniRef50_A2DCH4 Cluster: Putative uncharacterized protein; n=3; ...    33   8.8  

>UniRef50_Q2NFT3 Cluster: Hypothetical membrane-spanning protein;
           n=1; Methanosphaera stadtmanae DSM 3091|Rep:
           Hypothetical membrane-spanning protein - Methanosphaera
           stadtmanae (strain DSM 3091)
          Length = 635

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 239 TVRRPLYRNSNNLRGFVFLAMPDLLVYMYNSVLLLCDETVFCLVLIFYFLPTLCD--GII 412
           TV + L +   N+ G VF  +   ++  YN + LL    V C++L+F F+P   D  G +
Sbjct: 374 TVDKILMKIFGNIIGLVFAIVVSTIIIHYNQLYLLNILCVMCVLLLFGFIPNHSDKSGFL 433

Query: 413 PLYTL 427
            + TL
Sbjct: 434 VMATL 438


>UniRef50_A4RU77 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 290

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 91  KTCFSLYFYSAASKSTRVSSKNAAGDVKFFLIY 189
           ++ F +YFYSA SKS++ SS N+AG    F +Y
Sbjct: 77  ESAFEVYFYSARSKSSKRSSTNSAGIDAMFDVY 109


>UniRef50_Q8NFX7 Cluster: Syntaxin-binding protein 6; n=20;
           Euteleostomi|Rep: Syntaxin-binding protein 6 - Homo
           sapiens (Human)
          Length = 210

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 683 WLISGIDKCCSYFKISHHICKRYIKNNMAEY 775
           W+ S   + C++F+I HH C+RY+ +   E+
Sbjct: 111 WVASTASEKCTFFQILHHTCQRYLTDRKPEF 141


>UniRef50_Q54BD1 Cluster: Kinase motif-containing (KMC) protein;
           n=1; Dictyostelium discoideum AX4|Rep: Kinase
           motif-containing (KMC) protein - Dictyostelium
           discoideum AX4
          Length = 395

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 24/62 (38%), Positives = 37/62 (59%)
 Frame = -3

Query: 566 IHADRGKQSRIKRFSTINLHELFLFTLGIYHLKLAKSYCHEHMRPNGVYIMELYHRRELV 387
           I++DR  QSR   F  ++ + +  FT+GI +L+L  S  ++H+ PN  YI  L   RE+V
Sbjct: 281 IYSDR-HQSR-NLFKVVSSNTVS-FTVGIIYLELLLSTIYDHVFPNEEYINSL---REIV 334

Query: 386 EN 381
            N
Sbjct: 335 RN 336


>UniRef50_Q22AL8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1892

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 674  ISIWLISGIDKCCSYFKISHHICKRYIKNNMAEYFEVFFKSD 799
            +S +++ G  +CC Y K S  I K+   +N+ + F  F+K +
Sbjct: 1396 VSAYMLQGEGRCCIYCKSSQSITKQIQNSNIEDLFLKFYKRE 1437


>UniRef50_A7S6D0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 95

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 306 IY*YICIIAFCSYVTRLYSASY*YFIFYQLSAMV*FHYIHSV-WPHVFM 449
           I+ YI  + FC      YS    YF  Y L A   F YIH++ + H+F+
Sbjct: 33  IFLYIHTLCFCHIFIHTYSVLLPYFYTYILCAFAIFLYIHTLCFCHIFI 81


>UniRef50_A2DCH4 Cluster: Putative uncharacterized protein; n=3;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1966

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 299  MPDLLVYMYNSVLLLCDETVFCLVLIFYFLPTLCDGIIPLYT 424
            M   + Y +N V+LL D   FC+ L FY   T+    I  ++
Sbjct: 1395 MKSFIQYSFNKVVLLIDVIAFCIALFFYLSWTVSSDAISFFS 1436


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,292,287
Number of Sequences: 1657284
Number of extensions: 16124661
Number of successful extensions: 37547
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37530
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)