Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00122
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 100 2e-20
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 90 3e-17
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 89 4e-17
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 85 7e-16
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 85 7e-16
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 84 2e-15
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 79 4e-14
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 72 7e-12
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 69 6e-11
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 69 6e-11
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 65 1e-09
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 63 4e-09
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 61 1e-08
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 54 1e-06
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 54 2e-06
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 52 6e-06
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 47 2e-04
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 44 0.003
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 41 0.019
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 39 0.057
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 37 0.30
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 35 0.92
UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3; Bur... 35 1.2
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 34 2.1
UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible ... 34 2.1
UniRef50_Q0FRC5 Cluster: Serine/threonine protein kinase; n=1; R... 33 3.7
UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural... 32 8.6
UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR) repeat... 32 8.6
UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 100 bits (239), Expect = 2e-20
Identities = 40/59 (67%), Positives = 52/59 (88%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 433
EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 94.7 bits (225), Expect = 1e-18
Identities = 50/98 (51%), Positives = 61/98 (62%)
Frame = +3
Query: 63 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 242
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 243 QALCTNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 356
+AL + + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 89.8 bits (213), Expect = 3e-17
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 430
+H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET AL+++K +L
Sbjct: 84 DHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHL 141
Score = 72.1 bits (169), Expect = 7e-12
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +3
Query: 78 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCT 257
+MDV+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLAE+C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCA 83
Query: 258 NIRFHWSRLTTTKS 299
+ H +L T S
Sbjct: 84 D---HSIKLLTVPS 94
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 89.4 bits (212), Expect = 4e-17
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +2
Query: 242 SGSVHEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 421
+G E+ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K FG++T LD L
Sbjct: 68 TGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKHFGDDTQELDTLL 127
Query: 422 DYLK 433
+ LK
Sbjct: 128 EILK 131
Score = 77.4 bits (182), Expect = 2e-13
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 27 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 206
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 207 ENCDEAAYKKLVQALC 254
NC+EA YKKLV LC
Sbjct: 56 NNCEEAMYKKLVTGLC 71
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 85.4 bits (202), Expect = 7e-16
Identities = 43/90 (47%), Positives = 57/90 (63%)
Frame = +3
Query: 33 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 212
+ +E P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 213 CDEAAYKKLVQALCTNIRFHWSRLTTTKSL 302
CD+ Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 75.8 bits (178), Expect = 5e-13
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 18/77 (23%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGL------------------CKIDKDGKARKIVGCSCVVIK 382
EH + LV V + K LGEWAGL CKID +GKARK+VGCSCVV+K
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCVVVK 137
Query: 383 DFGEETPALDVLKDYLK 433
D+GEE+ L++++DY+K
Sbjct: 138 DYGEESEGLNIVQDYVK 154
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 85.4 bits (202), Expect = 7e-16
Identities = 46/77 (59%), Positives = 54/77 (70%)
Frame = +3
Query: 27 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 206
+A EVEVP +G M V AL+ VL+ ALIH GL GL EAAKALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 207 ENCDEAAYKKLVQALCT 257
E C+E AYKKLV ALC+
Sbjct: 72 EGCEEEAYKKLVVALCS 88
Score = 49.6 bits (113), Expect(2) = 3e-11
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 323 KIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 433
++D++G ARK+V CSCVV+KD+GEE+ VL +Y +
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQ 180
Score = 40.3 bits (90), Expect(2) = 3e-11
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLC 322
EH+IPL+KV + K LGEW GLC
Sbjct: 89 EHKIPLIKVPDGKMLGEWVGLC 110
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 84.2 bits (199), Expect = 2e-15
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +2
Query: 254 HEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 418
+EH IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+ L L
Sbjct: 64 NEHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEESYGLKYL 118
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +3
Query: 81 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALC 254
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALC
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALC 63
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 79.4 bits (187), Expect = 4e-14
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 430
EH IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+ L +Y+
Sbjct: 76 EHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDDYKFLMEYI 133
Score = 72.1 bits (169), Expect = 7e-12
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +3
Query: 60 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAA 227
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 228 YKKLVQALCTNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 383
+ +LV+AL T + K+L +L + K+ A L K
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 72.1 bits (169), Expect = 7e-12
Identities = 30/57 (52%), Positives = 46/57 (80%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDY 427
E+++PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G ET L ++ ++
Sbjct: 83 ENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAETDELSMIMEH 139
Score = 55.2 bits (127), Expect = 8e-07
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +3
Query: 27 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLC 197
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 198 VLAENCDEAAYKKLVQALCTN 260
VL + EA KLV+ L +
Sbjct: 61 VLVSSVTEANIIKLVEGLAND 81
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 68.9 bits (161), Expect = 6e-11
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 24 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 179
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 27 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 200
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 201 LAENCDEAAYKKLVQALC 254
LAE+C+E YK+LV+ALC
Sbjct: 61 LAESCEEDCYKQLVEALC 78
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 430
E IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I D+G E+ A L+ ++
Sbjct: 80 ERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIVDYGVESEAYHYLQKHI 137
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 433
++ I LV +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T ALD L L+
Sbjct: 86 QNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ 144
Score = 58.0 bits (134), Expect = 1e-07
Identities = 37/87 (42%), Positives = 47/87 (54%)
Frame = +3
Query: 96 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFHW 275
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNID- 90
Query: 276 SRLTTTKSLENGLVSARLTRMARQGKL 356
L + E A LTRMA G +
Sbjct: 91 --LVSMDEREKLAQWAGLTRMAADGSV 115
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 62.9 bits (146), Expect = 4e-09
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 433
EHQI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A D +K+Y K
Sbjct: 71 EHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQAKDDIKEYFK 129
Score = 32.3 bits (70), Expect = 6.5
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 ILSGNNMDVNVALQEVLKTALIHGG-LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKL 239
+L + +D+N L +VL A H G LV + A A L NC+E Y KL
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKL 64
Query: 240 VQALC 254
V+A C
Sbjct: 65 VKAHC 69
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 EHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 418
E IPL V N+ K LG WAGL K+D +G ARKI+G S V + DFGE++ D L
Sbjct: 78 EKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDSAEKDFL 132
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 203
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 204 AENCDEAAYKKLVQALC 254
++ C E AYKKL+ LC
Sbjct: 60 SDVCSEPAYKKLITTLC 76
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +2
Query: 257 EHQIPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEETPALDVLKDYL 430
EH +P ++ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++ + + + +
Sbjct: 104 EHGVPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKSESAEEMISLI 163
Query: 431 K 433
K
Sbjct: 164 K 164
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 99 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALC 254
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALC 102
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +3
Query: 66 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQ 245
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 246 ALC 254
ALC
Sbjct: 61 ALC 63
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 397
+++I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 65 KNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 52.4 bits (120), Expect = 6e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +3
Query: 99 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQAL 251
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVAL 64
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 397
+ QIP+ KV+ LGEW G+ K K K CS V +K F E
Sbjct: 67 QFQIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 99 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFHWS 278
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC + H
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 279 RLTTTKSL 302
+ T ++L
Sbjct: 70 KKFTRRTL 77
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 156 EAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFH-WSRLTTTKSLENGLV-SARL 329
++AKA++ +QA VLA++C E YKKLV AL + W LENGL + L
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVEKGVLYLENGLAFQSSL 111
Query: 330 TRMARQGKLSA 362
R R + +A
Sbjct: 112 LRQRRSNQENA 122
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 40.7 bits (91), Expect = 0.019
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 99 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALC 254
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAIC 77
Score = 39.5 bits (88), Expect = 0.043
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 257 EHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 379
E + +V V +LGEW CKI +DG A +I CSC ++
Sbjct: 79 EQGVKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 39.1 bits (87), Expect = 0.057
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -1
Query: 445 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCLAILVNLAETSPFSKLFVVVNLDQWN 266
+AR L+ VL+H +R FL E+ D + A N A V LA+TSP ++ + + +Q +
Sbjct: 295 VARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTERHRLRDANQVH 354
Query: 265 LMFV 254
+ FV
Sbjct: 355 VDFV 358
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 36.7 bits (81), Expect = 0.30
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 81 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALC 254
M + L+ ++K A +V G+ E K + + C+LA+NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLC 58
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 35.1 bits (77), Expect = 0.92
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 138 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNI 263
L+HG++E KA++++QA L V+A + + + ALC +
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKL 176
>UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3;
Burkholderia|Rep: Hypothetical exported protein -
Burkholderia xenovorans (strain LB400)
Length = 157
Score = 34.7 bits (76), Expect = 1.2
Identities = 28/107 (26%), Positives = 46/107 (42%)
Frame = +3
Query: 126 IHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFHWSRLTTTKSLE 305
+ G L + A + LD+ + + + AA + L A +IR L +T +
Sbjct: 36 VAGKLNNAAQVAGQKLDQAASYIGQQVDATKSAAQQNLESASAPSIRIDPGALASTA--Q 93
Query: 306 NGLVSARLTRMARQGKLSAAPVLSSKISARKLQRWMCSRTTSSRRAN 446
L SA A+ GK ++ S + + RKLQ W + SS A+
Sbjct: 94 ANLQSAASATNAQLGKAASLTGQSLESAGRKLQEWSAQSSASSANAS 140
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 33.9 bits (74), Expect = 2.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 84 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNI 263
D N AL+ L+T + H VHG K LD R+ VL + N E + +QA +
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE-IQAHLERV 168
Query: 264 R 266
R
Sbjct: 169 R 169
>UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible
protein GADD45 alpha; n=72; Euteleostomi|Rep: Growth
arrest and DNA-damage-inducible protein GADD45 alpha -
Homo sapiens (Human)
Length = 165
Score = 33.9 bits (74), Expect = 2.1
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 87 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 221
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>UniRef50_Q0FRC5 Cluster: Serine/threonine protein kinase; n=1;
Roseovarius sp. HTCC2601|Rep: Serine/threonine protein
kinase - Roseovarius sp. HTCC2601
Length = 445
Score = 33.1 bits (72), Expect = 3.7
Identities = 34/100 (34%), Positives = 48/100 (48%)
Frame = +3
Query: 99 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFHWS 278
L++ L +L G V AAKA Q + VLAE DEA L +A+ + + +
Sbjct: 318 LEQHLTGSLGPMGRVIARRAAAKAATTEQLIAAVLAEFEDEAERMTLRRAIESALSQDAT 377
Query: 279 RLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSKISARK 398
L T L + ++ RLT + + APVL K SARK
Sbjct: 378 GLGTAPGLPDAALT-RLTDLLKPHLGPIAPVLVRK-SARK 415
>UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural
maintenance of chromosomes 1B; n=3; Mammalia|Rep:
PREDICTED: similar to structural maintenance of
chromosomes 1B - Ornithorhynchus anatinus
Length = 1329
Score = 31.9 bits (69), Expect = 8.6
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Frame = +3
Query: 138 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRF---HWSRLTTTKSLEN 308
L+HG H + + EN +E + +++ C+ RF H SR LE
Sbjct: 35 LIHGAHIGKPVSTTASVKVVYIEENGEEKTFSRIIHGDCSEFRFNDNHVSRSAYAAELEK 94
Query: 309 -GLVSARLTRMARQGKLSAAPVLSSK 383
G++S + QG + + + K
Sbjct: 95 IGIISKARNCLVFQGTVESIAMKKPK 120
>UniRef50_Q6ZDB7 Cluster: Putative pentatricopeptide (PPR)
repeat-containing protein; n=2; Oryza sativa|Rep:
Putative pentatricopeptide (PPR) repeat-containing
protein - Oryza sativa subsp. japonica (Rice)
Length = 735
Score = 31.9 bits (69), Expect = 8.6
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 87 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENC--DEAAYKKLVQALCTN 260
V + L+ L+TA + L+HGL A + + + A++C D Y +V LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 261 IRFHWSRLTTTKSLENG 311
R + + +++ NG
Sbjct: 191 GRTEEAEVLLEEAMSNG 207
>UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 545
Score = 31.9 bits (69), Expect = 8.6
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 135 GLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCTNIRFHWS 278
G+V GLH +++ QA L V+A+ D + + LC I ++
Sbjct: 290 GVVDGLHHITYYIEQNQAQLAVIAQEVDPIEFAVWLSVLCQKIEVFYA 337
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,194,385
Number of Sequences: 1657284
Number of extensions: 9263069
Number of successful extensions: 27558
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27550
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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