Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00121X
         (588 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X4Y7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.53 
UniRef50_A0EYZ7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q8I576 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_Q184V5 Cluster: Putative exported protein precursor; n=...    33   4.9  
UniRef50_A0D034 Cluster: Chromosome undetermined scaffold_329, w...    33   4.9  
UniRef50_A1ZJI9 Cluster: Two component regulator three Y motif f...    33   6.5  

>UniRef50_Q4X4Y7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 99

 Score = 36.3 bits (80), Expect = 0.53
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -2

Query: 461 KVICYLLLKLGIRRF-CI----KTYYILNN--KLQYTYYYRHYYEKLWVDHFCADIYNFP 303
           +++ +L L L ++ F C     + Y++L+N   L Y Y Y  YY +L V H C   +  P
Sbjct: 17  QLVVHLCLYLFLQHFHCYYNFYRFYFLLHNLSSLLYAYKYLGYYLQLLVSHHCVSFFQLP 76

Query: 302 H 300
           H
Sbjct: 77  H 77


>UniRef50_A0EYZ7 Cluster: Putative uncharacterized protein; n=1;
           Ecotropis obliqua NPV|Rep: Putative uncharacterized
           protein - Ecotropis obliqua NPV
          Length = 280

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 416 CIKTYYILNNKLQYTYYYRHYYEKLWVDHFCADIYNF 306
           C+ T+YI +NK+ Y +YY H+     V  F + ++ +
Sbjct: 45  CVSTFYIADNKIDYFFYYSHWSFMSAVLMFASSLFTY 81


>UniRef50_Q8I576 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1130

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -2

Query: 494 TKNNTRKNNVSKVICYLLLKLGIRRFCIKTYYILNNKLQYTYYYRHYYEKLWVDHFC 324
           +KN  +  N+ K + Y   ++  +   IK   I N  L YT Y+   YE    D FC
Sbjct: 787 SKNKNKNENLHKDLLYFFKRVNEKSCHIKWNSINNIYLNYTLYFNKNYEINMYDLFC 843


>UniRef50_Q184V5 Cluster: Putative exported protein precursor; n=2;
           Clostridium difficile|Rep: Putative exported protein
           precursor - Clostridium difficile (strain 630)
          Length = 134

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = -2

Query: 491 KNNTRKNNVSKVICYLLLKLGIRRFCIKTYYILNNKLQYTYYYRHYYEKLWVDHFCADIY 312
           K +  K+N+  +      K        K YY  + + +Y Y+Y   Y  L+V+     IY
Sbjct: 44  KQDISKDNIKSITKEKAKKASYEGILYKVYYKDDPRYEYQYFYSDNYYALYVNKVMLQIY 103

Query: 311 NFPHN 297
           +  +N
Sbjct: 104 DMENN 108


>UniRef50_A0D034 Cluster: Chromosome undetermined scaffold_329,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_329,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 784

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -2

Query: 440 LKLGIRRFCIKTYYILNNKLQYTYYYRHY-YEKLWVDHFCADIYN--FPHNTLQ*CILIL 270
           L L I+R  I         LQYT YY+ Y +  +  ++F  +I N  F +N L+  +LI 
Sbjct: 183 LSLSIKRLTINKNSCSIKNLQYTSYYKIYDFSSIEQENFIYEIDNNFFVYNCLRKRVLIQ 242

Query: 269 FWLH 258
            +LH
Sbjct: 243 IFLH 246


>UniRef50_A1ZJI9 Cluster: Two component regulator three Y motif
           family; n=1; Microscilla marina ATCC 23134|Rep: Two
           component regulator three Y motif family - Microscilla
           marina ATCC 23134
          Length = 1196

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -2

Query: 422 RFCIKT-YYILNNKLQYTYYYRHYYEK--LWVDHFCADIYNFPHNT 294
           RF   T YY  +  +QY+YY  ++ +K   WV+H   +  N P  T
Sbjct: 706 RFAFSTPYYTQSETIQYSYYLENFDQKWSTWVNHKEKEYTNLPEGT 751


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,452,438
Number of Sequences: 1657284
Number of extensions: 8932819
Number of successful extensions: 17916
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17781
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)