Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00121X
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    32   0.004
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = -2

Query: 467 VSKVICYLLLKLGIRRFCIKTYYILNNKLQYT-YYYRHYYEKLW-------VDHFCADIY 312
           + K + YLLL      F I   Y+L   L Y  YY+R  YE  W       ++++C  +Y
Sbjct: 95  IRKNLYYLLL------FVINVLYVLT--LCYAVYYWRQQYEDFWHRYTLSFIENYCQFLY 146

Query: 311 NFPHNTLQ*CIL 276
           N  H+TL   IL
Sbjct: 147 NCFHSTLLLMIL 158


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 474 FARIVFCLLKFNS*KLKKPYCLYGGR 551
           F  I+ CL++FN+      YC Y  +
Sbjct: 255 FPIIIGCLIQFNTIVFSFCYCYYNSK 280



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 474 FARIVFCLLKFNS*KLKKPYCLY 542
           F  I+ CL++FN+      YC Y
Sbjct: 536 FIIIIGCLIQFNTIVFAFCYCYY 558


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 291 TVVHINPLLATHLL 250
           TV HI+P L TH++
Sbjct: 44  TVDHIDPYLCTHII 57


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 527 TLLPIWGTSSQPHLGG 574
           TLLP++G   QP + G
Sbjct: 32  TLLPLFGLKEQPKIEG 47


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 465 FQSHLLSIAETRDTPVLHQNLLY 397
           F++ LLS   T D P +H + +Y
Sbjct: 656 FETALLSSGFTLDEPQVHASRIY 678


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,897
Number of Sequences: 336
Number of extensions: 2746
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)