Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00121X
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   5.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.0  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 259 CSQKRINMHYCNVLCGK 309
           C +  I  H C  +CGK
Sbjct: 32  CKRHVIKPHICRKICGK 48


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 454 MTLETLFLRVLFFVYSN 504
           M + ++FL ++ F+YSN
Sbjct: 8   MFIHSIFLILIIFIYSN 24


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 454 MTLETLFLRVLFFVYSN 504
           M + ++FL ++ F+YSN
Sbjct: 8   MFIHSIFLILIIFIYSN 24


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 524 KTLLPIWGTSSQPHL 568
           + +LP W +SSQ H+
Sbjct: 238 REMLPYWMSSSQYHM 252


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 524 KTLLPIWGTSSQPHL 568
           + +LP W +SSQ H+
Sbjct: 238 REMLPYWMSSSQYHM 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,217
Number of Sequences: 438
Number of extensions: 3217
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)