Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00117
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 43 0.002
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 43 0.002
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 43 0.002
BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein MG... 39 0.019
BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein. 36 0.18
AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein. 36 0.18
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 282 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 416
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 246
H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 88 HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 282 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 416
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 246
H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 88 HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 282 YLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 416
+ P L NW+ T Q IN+ ++P RVLF N+ W +LAS
Sbjct: 148 FWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGK 246
H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 88 HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGK 135
>BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein
MGC12972 protein.
Length = 206
Score = 39.1 bits (87), Expect = 0.019
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 100 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKT 249
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + L EG+T
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQT 128
Score = 34.3 bits (75), Expect = 0.55
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 297 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 145 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 183
>BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 100 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 222
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
Score = 34.3 bits (75), Expect = 0.55
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 297 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 120 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158
>AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 100 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 222
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
Score = 34.3 bits (75), Expect = 0.55
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 297 EANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
+A+W Q +N F+PP RV ++N + GW +L+
Sbjct: 120 KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,121,815
Number of Sequences: 237096
Number of extensions: 2417641
Number of successful extensions: 7121
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7120
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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