Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00115
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 160 2e-38
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 148 1e-34
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 147 2e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 131 1e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 128 1e-28
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 121 2e-26
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 9e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 95 1e-18
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 93 7e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 84 3e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 4e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 79 9e-14
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 75 2e-12
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 74 3e-12
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 74 3e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 73 5e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 72 1e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 71 2e-11
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 71 3e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 69 7e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 1e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 69 1e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 65 1e-09
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 65 1e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 65 2e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 64 2e-09
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 63 5e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 62 9e-09
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 62 1e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 62 1e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 59 8e-08
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 58 1e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 55 2e-06
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 54 2e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 54 4e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 7e-06
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 52 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 52 2e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 51 2e-05
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 6e-05
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 48 1e-04
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 48 1e-04
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 48 2e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 47 3e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 46 6e-04
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 46 8e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 46 8e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 46 0.001
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 45 0.002
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 44 0.003
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 43 0.007
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 42 0.010
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 42 0.013
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 42 0.013
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 42 0.013
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 41 0.023
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 41 0.023
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 41 0.030
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 40 0.039
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.069
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 38 0.21
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 38 0.21
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 36 0.64
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 36 0.85
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.85
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 36 1.1
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 35 1.5
UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 34 2.6
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 34 2.6
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 3.4
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 34 3.4
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 33 4.5
UniRef50_A6EXE2 Cluster: Serine/threonine kinase with two-compon... 33 6.0
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.9
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 33 7.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 160 bits (389), Expect = 2e-38
Identities = 80/106 (75%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMP QKQTRAG RTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG + + HT
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G KIGKPHTVPCKVTG+CGSV VRLIPAP GTGIVSAPVPKKLL MAG+
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGI 219
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 148 bits (359), Expect = 1e-34
Identities = 68/106 (64%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDN 393
K + E L IKE++I+D+FL P LNDEV+K++P QKQTRAG RTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWGT + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 79.8 bits (188), Expect = 5e-14
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G +G PHTVP KV+GKCGSVTVRL+PAP G G+V+APV K+ LQ+AG++
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIE 193
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
++++KEWVPVTKLGRLV+ GKI +E IYL+SL K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 147 bits (357), Expect = 2e-34
Identities = 75/106 (70%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMP QKQT AG TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWG + + HT
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAP 590
G KIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 176 VPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
+PVTKLG L+ + KI LE IYLFSL K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 131 bits (317), Expect = 1e-29
Identities = 62/101 (61%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +1
Query: 232 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIG 408
EH+ +F IKE +I++ F+G L DEV+KI P QKQT AG R RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 409 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
LGVK KEVA +I+G++ILAKL+++PVRRGYWG++ E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G K+G+PHT+P KV GKCGSV VRLIPAP G GIV++ KK+L MAG+
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGL 209
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 158 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
+D+ WVP TKLGRLV++GKI LE I+LFSL K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 128 bits (309), Expect = 1e-28
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KEF+IID L P L DEV+ I P QKQTRAG RTRFKA V +GD+NGH+GLG+K +KEV
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
Query: 436 ATAIRGAIILAKLSVLPVRRGYWGT 510
A AIR II+AKLSV+P+RRGYWGT
Sbjct: 122 AGAIRAGIIIAKLSVIPIRRGYWGT 146
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G +G+PH++ K TGKCGSVTVRLIPAP G+GIV++P KKLLQ+AGV+
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVE 194
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
++K WVPVTKLGRLV+ GKI +E I+L SL K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 121 bits (291), Expect = 2e-26
Identities = 57/70 (81%), Positives = 62/70 (88%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
DEVLKIMP QKQT AG RTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 484 PVRRGYWGTR 513
P+R+GYWG +
Sbjct: 108 PLRQGYWGNK 117
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G KIGKP+TVPCKVTG CGSV V LIPAP GTG+VSAPVPKKLL MAG+
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGI 163
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (252), Expect = 9e-22
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E EI+D G S+ +EVL I QKQTRAG +TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 436 ATAIRGAIILAKLSVLPVRRGYW-GTRSESHTPS 534
A+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 67.3 bits (157), Expect = 3e-10
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
GKPHTV CK +GKCG+ V++IPAP GTGI+S V KK+ ++AG++
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIK 181
Score = 37.5 bits (83), Expect = 0.28
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 250
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/66 (72%), Positives = 50/66 (75%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMP QKQTRAG RTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 394 NGHIGL 411
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 92.7 bits (220), Expect = 7e-18
Identities = 43/59 (72%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Frame = +1
Query: 355 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWG + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G +I KPHTVP KVTG+CGSV VRLIPAP GTG VSAPVPKKLL MAG+
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGI 159
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKI 220
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 83.8 bits (198), Expect = 3e-15
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMP +K+TRAG RTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 394 NGHIG 408
NG+ G
Sbjct: 62 NGYAG 66
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 482 YQFEEVTGVQDRKATHRPLQGHRQVWFCNSPADSCP*WYWNCVCASS*EASSDGW 646
++ + + G QDR+A HRPLQG R + C +W+ + + + EA+ D W
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSW 145
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 80.2 bits (189), Expect = 4e-14
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGL 411
E L IKE EIID FLG +L DEVLK +PEQK TR G +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVG--QYYKA----GDYNGHVIT 121
Query: 412 GVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
G+ EVA I+ IIL KL ++PV RGY G++ S+ HT
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G K KPHTV CKVTG GSV++ LIPAP T I SAP+PKKLL MAG+
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGI 197
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 79.0 bits (186), Expect = 9e-14
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = -3
Query: 507 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLF 328
TPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 31 TPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLD 90
Query: 327 RHDL*NLIIQGRAEEEINDLEFFD 256
HDL + ++Q A+EEI+DLE F+
Sbjct: 91 GHDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = -3
Query: 507 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLF 328
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 327 RHDL*NLIIQGRAEEEINDLEFFD 256
R D+ N I+Q ++ +NDLEF D
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFLD 194
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = +3
Query: 486 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
S ++ LG KIGK H V CKVTG CGSV V LIPA GTGI SAPVP K L MAG+
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGI 55
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
IKE++I+D FL +L +E L I P QKQT AG +TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Query: 436 ATAIR 450
AI+
Sbjct: 151 QGAIQ 155
Score = 51.2 bits (117), Expect = 2e-05
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKN----SRSLISSSARP*MMRF*RSCLN 331
++EWVP+TKLGRLV+ GKI LE+I+ FS+ K L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 332 RNKHVPXSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 499
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 500 TGVQDRKATHRPLQGHRQVWFCNSPADSCP*WYWNCVCASS*EASSDGW 646
G QDR TH P+Q R+ S S YW E ++GW
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGW 223
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGL 411
E L I+E EI+D L P L+D+VL + Q+ T +G R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 412 GVKCSKEVATAIRGAIILAKLSVLPVRRG 498
+ KEVA+ IR AI AKL+++PV RG
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRG 99
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 516 GKPHT-VPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G P T VP K+TG+ GS V L+PAP+G G+V + +++L +AGV
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGV 152
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G K +PH VPC+VTG+CGS+ V LIPAP GTG VSAPVP KLL MAG+
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGI 194
Score = 55.6 bits (128), Expect = 1e-06
Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQ---KQTRAGXRTRFKAFVAIGDNNGHIGLGVKCS 426
IK E I FF S N L E KQT +TRFKA V +G + GH+ LG+K S
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYS 127
Query: 427 KEVATAIRGAIILAKLSVLPVRRGYWGTRSESH 525
EVA IILAKLS++PV G R E H
Sbjct: 128 MEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP 298
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/109 (37%), Positives = 57/109 (52%)
Frame = +1
Query: 154 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQ 333
QG + P K + + +L IKEFE+ DF LG L D+VLK+M Q
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 334 KQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 480
KQ +AG R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
KVTG+CGSV VRLIPAP GTGIVSAPVPKKLL MAG+
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGI 161
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/52 (69%), Positives = 37/52 (71%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFK 369
K + E L IKE EIIDFFLG SL DEVLKIMP QKQTRAG RTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = +1
Query: 262 EFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 441
E EI+D L P L ++VL + Q+ ++G R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 442 AIRGAIILAKLSVLPVRRG 498
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G PH++P G CGSV V L+PAP G G+V+ V K +L +AGV+
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVK 177
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/81 (38%), Positives = 53/81 (65%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE++I+D+ + P L DEV+ I Q+ T +G R + +G+ NG++G+G +KE
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEA 91
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
A AI+ AI AKL+++ ++RG
Sbjct: 92 APAIKKAIDNAKLNIIEIKRG 112
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
GKPHT+P V GK GSV+V L PAP G G+ V K +L+MAG+
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGI 165
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +1
Query: 250 FTIKEFEIIDFFLGPSLN----DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGV 417
+ IKE EIID L P +N EVL I + T +G R RF+ A+G+ +G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Query: 418 KCSKEVATAIRGAIILAKLSVLPVRRG 498
KEV AIR AI AKL+++ ++RG
Sbjct: 101 GHGKEVGIAIRKAINYAKLNIIEIKRG 127
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
+PH+VP V GK GSV VRLIP P G G+V V KK+L++AGVQ
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQ 181
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 170 EWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
EW P TKLG +V+EG+I + I+ Q K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/79 (35%), Positives = 50/79 (63%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 447
++++ G SL +V++ + + T++G + + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 448 RGAIILAKLSVLPVRRGYW 504
+ A+ AKL++ +RRGYW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
Score = 49.6 bits (113), Expect = 6e-05
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
GKP+T+ K +GK GSV V + PAP GTGIV++ +L+++G++
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIR 226
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I E EI+D L P L EV+ I QKQT AG +R+K V +G+ +G++ +G +K++
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI AK++++PVRRG
Sbjct: 100 RVAIQKAIRDAKMNIIPVRRG 120
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G+PH++P KV GK GSV V L+PAP GTG+V V K LL AG++
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIK 174
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +1
Query: 247 FFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCS 426
+ +KEFEI DFFL SL D+VLKI+P + R TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIP-LSRFRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 427 KEVATAI 447
K+V TA+
Sbjct: 75 KKVGTAV 81
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE EI+D L P L DEVL I Q+ T +G R +F+ VA+G+ +G++G +V
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQV 144
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI +AKL+++ V RG
Sbjct: 145 GGAIQKAIDVAKLNIIEVDRG 165
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G +++ K GK GSVTV + PAP G G+ +A + +L++AGV+
Sbjct: 174 GGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVE 219
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +1
Query: 331 QKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
QKQT+ G + R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3
Query: 510 KIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
++ + V KVT GSV V LIPAP GTGIVSAPV K L AG+
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGI 98
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
G KI KPHTV C+VT SV V I AP GT I+SAPVPKKLL+MA +
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASI 119
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
D L ++ + ++I +K+T AG +TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 457 IILAKLSVLPVRRGYWGTR-SESHTPS 534
IIL + S+ G+ G + ++ HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMA 644
KVTG+CGSV VRL AP GTGIVSAPVPKKLL MA
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA 159
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFK 369
K + E L IK EIIDFFLG SL +EVLK MP QKQTRAG TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+P TKLG LV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE E++D + P L DEVL I Q+ T +G R +F+ VA+G+ +G IG +V
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQV 93
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI +AKL+++ V RG
Sbjct: 94 GGAIQKAIDIAKLNIIDVSRG 114
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G+PHTV + GK GSV V L PAP G G+ +K+L++AG++
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIE 168
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 59.3 bits (137), Expect = 8e-08
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
IKEFE+ DF L L D+VLK+M +KQ AG RFK V I N ++ LGV+ KE+
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKEL 74
Query: 436 ATAIRGAIIL 465
A+ IIL
Sbjct: 75 LIAVCRTIIL 84
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E II L P L EV+ + QK T G TRFKA VA G+ NG++G+G SK++
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI A A L+V P++ G
Sbjct: 133 RIAIEKATNAAYLNVNPIKMG 153
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +3
Query: 525 HTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
H+VP KV GK GSVT+ +IPAP G G+V+ K+LL++AG++
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLK 207
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E II L P L EV+ + QK T G TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI A A L+V P++ G
Sbjct: 114 RIAIEKANNQALLNVGPIKLG 134
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = +3
Query: 525 HTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
H+VP KV GK GSV + ++PAP G G+V+ ++LL++AG++
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLK 188
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 480 FTSSKRLLGYKIGKPHTVPCKVTG-KCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
F++ G KIG PHT+PC VT + V V L AP GTG VSA VPKKL +A +
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 48.8 bits (111), Expect = 1e-04
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 447
+II+FFLG L DEVL+ M Q Q RTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 448 RGAIILAKLSVLPVRRGYWGTR-SESHT 528
+ AI L + + GY G + HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 GPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
GP ++VL++ K + G F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 469 KLSVL--PVRRGY 501
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +3
Query: 486 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
+ K + I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q
Sbjct: 127 AKKTAITVPITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQ 182
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
K + KEW+PVTKLGRLV++ KI LE IYLFSL K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +1
Query: 259 KEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVA 438
K+ II FFL SL DE IMP Q QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 439 TAI 447
TAI
Sbjct: 144 TAI 146
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
TV CKVTG+C SV + LIP P+ I+SAPVPKKLL +A +
Sbjct: 162 TVSCKVTGQCVSVLICLIP-PT-RNIISAPVPKKLLLLANI 200
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
G PH++P +V GK GSV V L PAP G GIV+ KK+ ++AG++
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIK 181
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 331 QKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 498
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESI 238
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGL 411
IKE++I+D L L +EV+ I QKQT G R KA VAIGD+NGH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 36.7 bits (81), Expect = 0.49
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 179 PVTKLGRLVREGKIDKLESIYLFSLQSK 262
PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L + V+ + K + G R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 478 VLPV 489
++ V
Sbjct: 72 LISV 75
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
T+P ++ G+ GS V + PA GTG++S + +L++AGV
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGV 121
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = -2
Query: 628 FLGTGADTIPVPLGAGISRTVTEPHLPVTLQGTVCGFPILYP 503
FLGT A+ +PVP+GAG+ T TEP P+TL G +CG L P
Sbjct: 36 FLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 295 SLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
+ + V+KI K T+ G RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 475 SVLPVRR 495
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 486 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAG 647
++ L+ K K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 105 ANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAG 158
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
DF G + + ++++ K + G F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 457 IILAKLSVLPV 489
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
T+P +V K + ++PA GTG+++ + +L++AGVQ
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQ 624
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +1
Query: 292 PSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 471
P L ++V+KI K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 472 LSVLPV 489
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++++I K T+ G F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 484 PV 489
V
Sbjct: 77 EV 78
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
T+P +V G+ + V L PA GTGI++ + ++++AG+Q
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQ 125
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++L + K + G R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 484 --PVRRG 498
PV G
Sbjct: 79 TVPVENG 85
Score = 37.5 bits (83), Expect = 0.28
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGI 126
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3
Query: 582 PAPSGTGIVSAPVPKKLLQMAGV 650
PAP GTGIVSAPVPKKLL MAG+
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGI 23
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L ++++ + K T+ G RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 478 VLPVR 492
+ V+
Sbjct: 138 MYKVK 142
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 510 KIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAG 647
K+ K T+ +V GK G+ V + PAP GTG+++ K +L++ G
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCG 187
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++LKI K T+ G F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 484 PV 489
+
Sbjct: 71 KI 72
Score = 41.5 bits (93), Expect = 0.017
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGV 118
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +1
Query: 283 FLGPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 462
F ++V+ I K T+ G RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 463 LAKLSVLPV 489
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
TVP +V G G+ V + PA GTG+++ + ++++AG+
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGI 152
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+++ K + G + +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 484 PV 489
V
Sbjct: 209 QV 210
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 258
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
+ ++KI K T+ G + F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +3
Query: 492 KRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
K L+ I K ++P V G G+ + + P+ G+G+++ + +L++AG++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIK 137
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+++ K + G + F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 484 PV 489
V
Sbjct: 246 TV 247
Score = 35.9 bits (79), Expect = 0.85
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 483 TSSKR-LLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
T+++R ++ + K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 238 TNARRNIITVPMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 295
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 289 GPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
G L ++++ I K + G R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 469 KLSVL--PVRRG 498
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 41.9 bits (94), Expect = 0.013
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +1
Query: 289 GPSLNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
G L D V+ I K + G F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 469 KLSVLPVRR 495
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 340 TRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 489
T+ G R F V +GD GH+G G +KEV AI I AK +V+ V
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRV 91
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAG 647
TVP V G G+ + ++PA GTG+V+ K + ++AG
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAG 136
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 173 WVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
W PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 41.1 bits (92), Expect = 0.023
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 477
D+++ I K + G R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 478 VLPVRRG 498
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
K HT+P +V GK S V L P+ +GTGI++ + +++ AG+Q
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQ 140
Score = 40.3 bits (90), Expect = 0.039
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 301 NDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 480
+++V+KI K + G R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 481 LPV 489
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 40.3 bits (90), Expect = 0.039
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V++I K + G + F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 484 PV 489
V
Sbjct: 128 RV 129
Score = 39.5 bits (88), Expect = 0.069
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +3
Query: 492 KRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
K L+ + K +++P ++G G+ V L PA GTG+++ + +L++AG++
Sbjct: 124 KALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIK 177
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.5 bits (88), Expect = 0.069
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+ I K + G R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 484 PV 489
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1
Query: 304 DEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V++I K + G + F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 484 PV 489
V
Sbjct: 79 EV 80
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 492 KRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
K+L+ + K +++ G G V + PA GTG+++ + +L++AGV+
Sbjct: 75 KQLIEVPLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVK 128
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 471
L ++++ I K + G R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 459 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 361
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 364 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 510
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W T
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLWHT 235
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 35.9 bits (79), Expect = 0.85
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 337 QTRAGXRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 353 QTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.85
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 301 NDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
++ V+ I K + G F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
T+P +V K G V L PA +GTG+++ + +L++AGV+
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVE 125
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
L ++V+ I K + G R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 337 QTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
QTR G + +G+ NG IGLG S + A+ A ++A +++P+RR
Sbjct: 263 QTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRR 315
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
L ++VL + K + G + F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_A4H7C3 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1313
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/94 (29%), Positives = 42/94 (44%)
Frame = -1
Query: 653 LYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVPQ*PLRTGKTD 474
+Y +HL R+ SS +R P C ++ AG + +S+ VP P +
Sbjct: 378 IYHAHLAASTRSSLAQPSSYSRPARSPACSPSSAAGAASAAPTPISNSVPAAPQSIRNSR 437
Query: 473 NLARIIAPRMAVATSLLHFTPKPI*PLLSPMATN 372
N + + V SL F P PLLSP+AT+
Sbjct: 438 NASNLNLAINHVRKSL--FIGPPPSPLLSPVATS 469
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGV 650
++P +V G+ G+ V LIPA +GTGI++ + + + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGI 130
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPSGTGIVSAPVPKKLLQMAG 647
+V G+ G+ V L PAP GTGI++ + ++++AG
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAG 174
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 525 HTVPCKVTGK-CGSVTVRLIPAPSGTGIVSAPVPKKLLQMAGVQ 653
HT+ +V GK C ++ V ++PAPSG GIV+ + + +AG++
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIK 111
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 337 QTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
QTR G V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 326 QTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 298 LNDEVLKIMPEQKQTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L ++++ + K + G F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 478 VLPV 489
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6EXE2 Cluster: Serine/threonine kinase with two-component
sensor domain; n=1; Marinobacter algicola DG893|Rep:
Serine/threonine kinase with two-component sensor domain
- Marinobacter algicola DG893
Length = 1684
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 581 NQPDCYRTTLAGDLARDGVWLSDLVPQ*PLRTGK 480
NQ DC+RT L G L +G + DLVP+ L G+
Sbjct: 393 NQLDCWRTELLGALGPNGALVIDLVPELALIIGE 426
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -1
Query: 182 QEPTLSGLPCRAHDHGRDH-YRVHEDRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 24
+EPT S CR+ GR H + R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 337 QTRAGXRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
QTR G + +G+ NG +G+G S E + A A +LA ++ P+RR
Sbjct: 256 QTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIRNMRPIRR 308
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -3
Query: 252 KENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 160
KE K + S + I P+ T PSLVTGTH F S
Sbjct: 23 KECKKISSMVVILPALTNLPSLVTGTHPFSS 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,791,485
Number of Sequences: 1657284
Number of extensions: 13328198
Number of successful extensions: 39465
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 37603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39414
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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