Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00114X
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.36
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.36
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.36
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.36
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 31 0.48
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 2.6
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 29 2.6
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 3.4
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 3.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 3.4
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF100656-4|AAF99969.1| 159|Caenorhabditis elegans Hypothetical ... 27 7.8
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 27 7.8
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 124 TCVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTC 249
TC G E SC C + SC+ C CP C Q C
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKC 632
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 124 TCVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTC 249
TC G E SC C + SC+ C CP C Q C
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKC 632
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 124 TCVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTC 249
TC G E SC C + SC+ C CP C Q C
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKC 632
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 124 TCVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTC 249
TC G E SC C + SC+ C CP C Q C
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKC 632
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCAC-PESSCLCPQTC 249
C + C + CP I C CP+ C P CL P TC
Sbjct: 645 CCAPPAPCCLPTIPCCPPIPC-CPQPKICCQPAPVCLPPPTC 685
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCAC-PESSCLCPQTC 249
C + C + CP I C CP+ C P CL P TC
Sbjct: 290 CCAPPAPCCLPTIPCCPPIPC-CPQPKICCQPAPVCLPPPTC 330
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCAC-PESSCLCPQTC 249
C + C + CP I C CP+ C P CL P TC
Sbjct: 242 CCAPPAPCCLPTIPCCPPIPC-CPQPKICCQPAPVCLPPPTC 282
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCAC-PESSCLCPQTC 249
C + C + CP I C CP+ C P CL P TC
Sbjct: 970 CCAPPAPCCLPTIPCCPPIPC-CPQPKICCQPAPVCLPPPTC 1010
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 30.7 bits (66), Expect = 0.63
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 130 VSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQTC 249
V + G C C C C C C C C C +TC
Sbjct: 70 VKRQGGGCGCCGCGCG--CCCCRPRCCCCCRRCCTCCRTC 107
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 163 SCACPEISCACPETSCACPES 225
+C E SC+C C+CPES
Sbjct: 99 ACDDSECSCSCSGGECSCPES 119
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 163 SCACPEISCACPETSCACPES 225
+C E SC+C C+CPES
Sbjct: 225 ACDDSECSCSCSGGECSCPES 245
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 TCVSQNTGTCPESSCACPEISCAC-PETSCACPESSCLCPQTCR 252
TC+ Q + P A P C P S +C + LCPQ CR
Sbjct: 244 TCIQQIQISVPLPPPA-PRCDSMCMPSCSPSCVQQYSLCPQQCR 286
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 166 CACPEISCACPETSCACPESSCLCPQT 246
C+C ++S +CP TS C C C QT
Sbjct: 247 CSCSQVSSSCPGTS-QCQNKVC-CQQT 271
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTCR 252
C + G C C + C + C CP LC + CR
Sbjct: 1544 CSEGSFGPACSQQCNCGKYKCDATDGKCICPVGRHGPLCEEECR 1587
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +1
Query: 127 CVSQNTGTCPESSCACPEISCACPETSCACP--ESSCLCPQTCR 252
C + G C C + C + C CP LC + CR
Sbjct: 1544 CSEGSFGPACSQQCNCGKYKCDATDGKCICPVGRHGPLCEEECR 1587
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +1
Query: 154 PESSCACPEISCACPETSCACPESSCLCPQTCR 252
P S C C + C + CAC C +C+
Sbjct: 111 PTSGCQCAKGKKQCVKKECACRTVYGFCSASCK 143
>AF100656-4|AAF99969.1| 159|Caenorhabditis elegans Hypothetical
protein F49F1.5 protein.
Length = 159
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 151 CPESSCACPE--ISCACPETSCACPESSCLC 237
C ++S +CP+ I+C P CP S C
Sbjct: 19 CMDTSLSCPDQVIACFEPSVQSECPYSCATC 49
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 130 VSQNTGTCPESSCACPEISCAC 195
+S TG+ E+ CAC +CAC
Sbjct: 126 LSLRTGSSNENGCACVHGNCAC 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,227,223
Number of Sequences: 27780
Number of extensions: 46005
Number of successful extensions: 336
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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