Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00113
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 138 6e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 135 5e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 123 3e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 123 3e-29
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 115 8e-27
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 62 6e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.31
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.94
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.94
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.6
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.8
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.6
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 6.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 6.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 138 bits (335), Expect = 6e-34
Identities = 67/80 (83%), Positives = 72/80 (90%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+
Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSL 207
Query: 690 LTIEDGIFEVKSTAGGHPLG 749
LTIE+GIFEVK+TAG LG
Sbjct: 208 LTIEEGIFEVKATAGDTHLG 227
Score = 130 bits (315), Expect = 2e-31
Identities = 60/86 (69%), Positives = 69/86 (80%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSM 429
PHNTIFDAKRLIGRKF+D VQ+DMKHWPF+ KP ++V YKGE KT PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VL KM+ETAEAYLG V +AV+TVPA
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPA 146
Score = 112 bits (269), Expect = 6e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 135 bits (327), Expect = 5e-33
Identities = 66/80 (82%), Positives = 71/80 (88%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+
Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSL 207
Query: 690 LTIEDGIFEVKSTAGGHPLG 749
LTIE+GIFEVK+TAG LG
Sbjct: 208 LTIEEGIFEVKATAGDTHLG 227
Score = 124 bits (300), Expect = 1e-29
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSM 429
PHNTIFDAKRLIGR+F D VQ+DMKHWPF+ KP I+V +KGE KT PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VL KM+E+AEA+LG V +AV+TVPA
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPA 146
Score = 112 bits (269), Expect = 6e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 123 bits (296), Expect = 3e-29
Identities = 56/80 (70%), Positives = 73/80 (91%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+
Sbjct: 181 FNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSL 239
Query: 690 LTIEDGIFEVKSTAGGHPLG 749
L+I++G+FEV +T+G LG
Sbjct: 240 LSIDNGVFEVLATSGDTHLG 259
Score = 103 bits (246), Expect = 4e-23
Identities = 47/86 (54%), Positives = 63/86 (73%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSM 429
P NTIFD KRLIGRKF++ T+ D+K +PF +P ++V G+ K PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
+L+KMK+TAEAYLGK V +AV+TVPA
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPA 179
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 123 bits (296), Expect = 3e-29
Identities = 60/80 (75%), Positives = 67/80 (83%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
F+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+
Sbjct: 152 FSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSL 211
Query: 690 LTIEDGIFEVKSTAGGHPLG 749
L I+ G+FEV +TAG LG
Sbjct: 212 LKIQGGVFEVLATAGDTHLG 231
Score = 106 bits (255), Expect = 3e-24
Identities = 50/86 (58%), Positives = 61/86 (70%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSM 429
P NT+FDAKRLIGR++ED Q D+KHWPF+ P I+V Y GE K +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VLTKMKE +EA L K V+ AVITVPA
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPA 150
Score = 100 bits (239), Expect = 3e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 115 bits (276), Expect = 8e-27
Identities = 55/80 (68%), Positives = 66/80 (82%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SI
Sbjct: 194 FNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISI 251
Query: 690 LTIEDGIFEVKSTAGGHPLG 749
L + +G+FEV+ST G LG
Sbjct: 252 LELNNGVFEVRSTNGDTHLG 271
Score = 74.9 bits (176), Expect = 1e-14
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSM 429
P NT F KRLIGR+F++ VQ D+K P++ + KT P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
+L+KM+ETA YLGK V+NAV+TVPA
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPA 192
Score = 73.3 bits (172), Expect = 3e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 62.5 bits (145), Expect = 6e-11
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTF 677
F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G +
Sbjct: 152 FTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNY 211
Query: 678 DVSILTIEDGIFEVKSTAGGHPLG 749
VSI+ G F +KST LG
Sbjct: 212 SVSIVEFSRGQFHIKSTVCDRNLG 235
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 35.9 bits (79), Expect = 0.006
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQ-ADMKHWPFEXXXXXXKPKIKVAYKGEDKTIFPEEVSSMV 432
NT+ KRL GR ++D ++ + + KV Y E+ ++ +
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 433 LTKMKETAEAYLGKTVQNAVITVPA 507
TK+K AEA L +V + VI++PA
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPA 150
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 391 EDKTIFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 504
++K + E S L ++ E+AE +LG V V++VP
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVP 171
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNV 280
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.94
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 313
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 748 PSGCPPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 617
P PP + IP PPPRS ST R P P S
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 736 PPAVDFTSKIPSSMVRMDTSKVPPP 662
PPA++FTS I + + ++ + P P
Sbjct: 187 PPAINFTSDICNEQIELEYKRKPIP 211
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 AAKNQVAMNPTTQYSMPNVSSDVSSKML 307
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,306,278
Number of Sequences: 5004
Number of extensions: 70874
Number of successful extensions: 259
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -