BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00112 (686 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae Q0... 42 1e-04 SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 5.9 SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 26 5.9 SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 26 5.9 SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 7.8 SPCC330.12c |sdh3||succinate dehydrogenase |Schizosaccharomyces ... 25 7.8 >SPMIT.10 |atp9||F0-ATPase subunit 9; similar to S. cerevisiae Q0130|Schizosaccharomyces pombe|chr mitochondrial|||Manual Length = 74 Score = 41.5 bits (93), Expect = 1e-04 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 302 FGSLIIGYARNPSLKQQLFSYAILGFALSE 391 F +LI G +RNPS++ LFS AILGFAL+E Sbjct: 28 FSNLISGTSRNPSVRPHLFSMAILGFALTE 57 >SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|||Manual Length = 822 Score = 25.8 bits (54), Expect = 5.9 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 Query: 253 VSDSGSSWFRSWYW 294 V D G SWFR+ YW Sbjct: 419 VLDCGMSWFRNEYW 432 >SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|Schizosaccharomyces pombe|chr 1|||Manual Length = 512 Score = 25.8 bits (54), Expect = 5.9 Identities = 10/38 (26%), Positives = 17/38 (44%) Frame = +2 Query: 50 NAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTC 163 + VC R C ++ + L + +C + DGTC Sbjct: 417 SGVCTSASRQCKKLTNFSSLSCHSDSCKVSCQNEDGTC 454 >SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces pombe|chr 1|||Manual Length = 612 Score = 25.8 bits (54), Expect = 5.9 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +3 Query: 219 DIDSAAKFIGAGQRQWE*LVPELVLEQSSAPSS 317 D++SAA+FI +GQ + LVP ++ +S SS Sbjct: 31 DVESAAEFIFSGQLEKSRLVP--IMSSTSIASS 61 >SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 517 Score = 25.4 bits (53), Expect = 7.8 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = +1 Query: 184 QCGPSRPHRSLRTLTLLPNSLVLVSDSGSSWFRSWYWNSLRLPHHRLCQEPL 339 +C PS P SL+ SL+ V D S+ S WN P +L EPL Sbjct: 420 KCAPSSPTLSLQKHREHVKSLLYVPDLTPSFDGSDPWN----PSSQLLSEPL 467 >SPCC330.12c |sdh3||succinate dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 180 Score = 25.4 bits (53), Expect = 7.8 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = +1 Query: 124 HLQQYPPIHRWYLLSLHSSLQC 189 HL Y P WYL SLH C Sbjct: 63 HLTIYEPQLTWYLSSLHRITGC 84 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,867,836 Number of Sequences: 5004 Number of extensions: 60261 Number of successful extensions: 196 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 196 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 317927284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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