Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00110
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    36   0.028
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    29   4.3  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     29   4.3  
Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = +1

Query: 550 MGRVIRAQRKGAGSVFVSHT*KRKGAPKL 636
           MGR IR QRKGAG +F SH   RKGA KL
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKL 29



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 611 RRGKALLNYRSLDYAERHGYIKGVVK 688
           R+G + L  R LDYAERHGYIKG+VK
Sbjct: 23  RKGASKL--RPLDYAERHGYIKGLVK 46


>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = -2

Query: 360 FESFVKEHNREYKDDADRELHYQSFKKNLAEINQLTRR 247
           FE F K++NR+YKD+++ +  + +F K+   +++L  +
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAK 80



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 238 TTFGINKFADYTPEEQQSRLGLRLPAKKT 152
           T FGINKF+D +  E   RL   +P+  T
Sbjct: 88  TQFGINKFSDLSTAEFHGRLSNVVPSNNT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 360 FESFVKEHNREYKDDADRELHYQSF 286
           FE F+ ++ R YKD+ +++  +Q F
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQF 71


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 360 FESFVKEHNREYKDDADRELHYQSFKKNLAEINQLTR 250
           F  F K+ +R YK +A+ +L  Q+F K+   + +L +
Sbjct: 44  FVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNK 80


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 267  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 401
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 5596 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 5641


>Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical
           protein F33A8.7 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = -2

Query: 462 NFVSVAL-LIATVVMASSA-DTDPPRHYDLNQ 373
           N+V V L L+ATVV+++ A DTD     DLNQ
Sbjct: 7   NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -2

Query: 390 HYDLNQAKELFES-FVKEHNREYKDDADRELHYQ 292
           HYD+ QA   FES  + + N++++D   +E + Q
Sbjct: 192 HYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,832,966
Number of Sequences: 27780
Number of extensions: 296074
Number of successful extensions: 771
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)