Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00108
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 120 2e-26
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 120 3e-26
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 105 6e-22
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 105 6e-22
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 99 7e-20
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 97 2e-19
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 95 8e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 94 2e-18
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 93 4e-18
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 89 7e-17
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 84 3e-15
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 83 6e-15
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 79 6e-14
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 54 3e-06
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 45 0.001
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 37 0.31
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 36 0.95
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 35 1.3
UniRef50_UPI0000E4731C Cluster: PREDICTED: hypothetical protein;... 34 2.2
UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection... 34 2.2
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 3.8
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_P53217 Cluster: Uncharacterized membrane protein YGR026... 33 3.8
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 5.0
UniRef50_Q9VHR3 Cluster: CG11718-PA; n=2; Drosophila melanogaste... 33 5.0
UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1; ... 33 6.7
UniRef50_Q5E0L8 Cluster: Acriflavin resistance periplasmic prote... 33 6.7
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 33 6.7
UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 8.8
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 120 bits (290), Expect = 2e-26
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 434
+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR P TVL++G +NARE
Sbjct: 84 DDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNARE 142
Query: 435 AVRHFGPAPGAPRSHTKPYVRTKGQK 512
AV+HFGPAPG P SHTKPYVR+KG+K
Sbjct: 143 AVKHFGPAPGVPHSHTKPYVRSKGRK 168
Score = 69.3 bits (162), Expect = 6e-11
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +1
Query: 22 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 201
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 202 MKKPPREGLIAVVVGTVT 255
M+ +EG I VVVG VT
Sbjct: 68 MQ--GKEGKIGVVVGAVT 83
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 120 bits (288), Expect = 3e-26
Identities = 56/90 (62%), Positives = 68/90 (75%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
RE RHFG APG P SHTKPYVR+KG+K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 97.1 bits (231), Expect = 3e-19
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +1
Query: 1 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 181 VSRLARHMKKPPREGLIAVVVGTVT 255
+SR+ R MK P RE AVVVGT+T
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTIT 87
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 105 bits (253), Expect = 6e-22
Identities = 51/90 (56%), Positives = 62/90 (68%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +D RL+ M V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G
Sbjct: 139 GSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPT 198
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
AR A +HFG APG P+S +PYVR+KG+K
Sbjct: 199 KARTAEKHFGSAPGRPKSKARPYVRSKGRK 228
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSIT 142
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 105 bits (253), Expect = 6e-22
Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
GD +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G++
Sbjct: 91 GDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRK 150
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK-KQG 521
+ RE+VRHFG A G P SH+KPY +G++ K+G
Sbjct: 151 SGRESVRHFG-ASGVPGSHSKPYATNRGKETKRG 183
Score = 40.7 bits (91), Expect = 0.025
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK------PPREGLIAVVVGTV 252
T++ FN++V +RL SR NR PIS+SR+A MK+ + IAVVVG V
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDV 93
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 99.1 bits (236), Expect = 7e-20
Identities = 49/93 (52%), Positives = 63/93 (67%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G +
Sbjct: 300 GTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK 359
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQKKQG 521
REA++HFG A G P SH KPYV ++ +G
Sbjct: 360 -VREALKHFGRAAGLPGSHAKPYVSHTARRGKG 391
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
T+++FN VLRRL +R R PISVSRL + + + VVVGTVT
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVT 303
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G ND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G
Sbjct: 83 GTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGAT 142
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
AREAV+HF + + KPYVR+KG+K
Sbjct: 143 KAREAVKHF---RNEVKGNPKPYVRSKGRK 169
Score = 50.0 bits (114), Expect = 4e-05
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
T+ FN++VL+RL M R + P+S+S+L++HM+K P AVVVGTVT
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEKRPDN--TAVVVGTVT 86
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 95.5 bits (227), Expect = 8e-19
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P TVL+ G R
Sbjct: 120 GTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSPKVCSTVLLSGPR 179
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
RE HF A G P SHTKPYVR+KG+K
Sbjct: 180 KGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 163 NRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
N+PP+S+SR+ MK P +E AVVVGT+T
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTIT 123
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 434
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 435 AVRHFGPAPGAPRSHTKPYVRTKGQK 512
AV+HF + + KPYVR+KG+K
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRK 207
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVTMT 261
T+ FN+IVL+RL M R + P+S+S+L++HM+ P AVV+GTVT T
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHMESRPNN--TAVVIGTVTST 88
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 93.1 bits (221), Expect = 4e-18
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++G R
Sbjct: 85 GTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPR 144
Query: 423 NAREAVRHFGPAP---GAPR--SHTKPYVRTKGQKK 515
N+REAVRHFG P APR S + + R +G+++
Sbjct: 145 NSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRR 180
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +1
Query: 16 KHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLA 195
+H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVSR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 196 RHMKKPPREGLIAVVVGTVT 255
R +K+ VVVGTVT
Sbjct: 69 RALKQEGAANKTVVVVGTVT 88
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 89.0 bits (211), Expect = 7e-17
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +DVRL +PK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R
Sbjct: 380 GTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR 435
Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQKKQG 521
RE ++HFG A G P SH KPYV ++ +G
Sbjct: 436 -VREELKHFGRAAGLPGSHAKPYVSHTARRGKG 467
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVT 383
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 83.8 bits (198), Expect = 3e-15
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = +3
Query: 270 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 449
Y +PKM V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN REA++HF
Sbjct: 90 YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNVREALKHF 149
Query: 450 G 452
G
Sbjct: 150 G 150
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +1
Query: 1 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
ID++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 3 IDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVS 62
Query: 181 VSRLARHMKKPPREGLIAVVVGTVT 255
S+LA MKK P E AV V TVT
Sbjct: 63 TSKLACLMKKHPEE--TAVCVNTVT 85
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 434
ND RL IP+MT+ AL + AR+RI AGG ++FD+L PTG VL+QG+R+ R
Sbjct: 87 NDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTGDNCVLLQGRRSCRA 146
Query: 435 AVRHFGPAPGAPRSHTKPYVRTKGQK 512
+ FG +PG P SH KP KG++
Sbjct: 147 VCKKFG-SPGRPNSHVKPKGEHKGRR 171
Score = 50.0 bits (114), Expect = 4e-05
Identities = 32/77 (41%), Positives = 40/77 (51%)
Frame = +1
Query: 25 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 204
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 205 KKPPREGLIAVVVGTVT 255
K RE IAVV TVT
Sbjct: 72 HK--REDKIAVVASTVT 86
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 79.4 bits (187), Expect = 6e-14
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 434
+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ +
Sbjct: 58 DDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETD 117
Query: 435 AVR 443
R
Sbjct: 118 MER 120
Score = 62.5 bits (145), Expect = 7e-09
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 109 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPPREGLIAVVVGTVT 255
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCIT 57
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +3
Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
G +++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+ +P +G +
Sbjct: 72 GTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSP--------KGPQ 123
Query: 423 NAREAVRHFGPAPGAPRSHTKPYV-RTKGQKKQG 521
+ RH G G+P S+ KPYV T G+ +QG
Sbjct: 124 KCYQGYRHLGKVSGSPHSYAKPYVGSTGGKLEQG 157
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +1
Query: 1 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP++
Sbjct: 112 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLA 171
Query: 181 VSRLARHMKKPPREGL 228
+SR+ P GL
Sbjct: 172 LSRMVSETVPRPPVGL 187
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 25 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 204
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 205 KKPPREGLIAVVVGTVT 255
++G I VV+G+VT
Sbjct: 72 --DGKKGKIVVVIGSVT 86
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 25 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 204
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 205 KKPPREGLIAVVVGTVT 255
++G I VV+G+VT
Sbjct: 72 --DGKKGKIVVVIGSVT 86
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/93 (29%), Positives = 44/93 (47%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 434
+D + IP + V AL ++ + +I GG I T DQL P LV + +R
Sbjct: 91 DDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRR 150
Query: 435 AVRHFGPAPGAPRSHTKPYVRTKGQKKQGPVVV 533
+ + +GPAPG S T P K ++ +++
Sbjct: 151 SAKFWGPAPGEKGSTTYPRANQKCHNREKRIMM 183
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 282 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 410
K+ VAA+ ++ KA +++ AGGE+LT +L + P G +V
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGSGVRIV 121
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 35.5 bits (78), Expect = 0.95
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +3
Query: 255 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
ND R+ K PK+ + AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 111 NDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 524 WALLFLSLGANIGFSVRARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNF 348
W + ++ L FS+ A W K T +I+LT Q+CLL R+T + NF
Sbjct: 51 WPIWYIELVFATLFSLNAVFDFWKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTSNF 110
Query: 347 SSSSQ 333
+ SS+
Sbjct: 111 ARSSK 115
>UniRef50_UPI0000E4731C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 355
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = -2
Query: 374 SQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVIVTVPTTTAIKPSRGGFFM 201
SQL+ ++ +SS+S A + ++ + H ++ Q +++T+P T+IK G+FM
Sbjct: 177 SQLLAARLYSSTSGIATNYILASDRAKNLH--FIQQGALVLTLPAVTSIKAMCSGYFM 232
>UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection of
telomeres 1 (hPot1) (POT1-like telomere end-binding
protein); n=4; Mammalia|Rep: PREDICTED: similar to
Protection of telomeres 1 (hPot1) (POT1-like telomere
end-binding protein) - Canis familiaris
Length = 942
Score = 34.3 bits (75), Expect = 2.2
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = +2
Query: 380 CSDWQEDSTGTRSAKCS*GSASLWPCSRSTALSH*TLCSHQGTEK 514
C QEDS T S+K S GS SL+ R LS L HQ EK
Sbjct: 609 CHSEQEDSLRTLSSKDSSGSVSLYEIERCQQLSATILTDHQYLEK 653
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -2
Query: 455 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 276
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 275 LVQ 267
L++
Sbjct: 257 LME 259
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 33.5 bits (73), Expect = 3.8
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 443 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL-VQ 267
+HC + I LT Q CL S S L +F +SS F N + +R+ YL +
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYLEIT 657
Query: 266 SHVIVTVPTTTAIK 225
S+ P+ + +K
Sbjct: 658 SNDFQQFPSISLLK 671
>UniRef50_P53217 Cluster: Uncharacterized membrane protein YGR026W;
n=4; Saccharomycetales|Rep: Uncharacterized membrane
protein YGR026W - Saccharomyces cerevisiae (Baker's
yeast)
Length = 278
Score = 33.5 bits (73), Expect = 3.8
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = -2
Query: 524 WALLFLSLGANIGFSVRAR-----CSWS-----RAKVTHCLTSISLTLYQYCLLASRSTK 375
W LFL + N F R SWS R + S S+T+ Q + T
Sbjct: 60 WKWLFLRVNKNYSFIQSKRWYMKLLSWSPQVMYRLSLIGVFMSESVTMQQNWV-GLNPTW 118
Query: 374 SQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVIVT 249
+ L+ S+NF + AC FFG KS ++ L Y++ S++ +T
Sbjct: 119 NDLLSSENFHTLLI-ACLWFFGGGKSFYKILPYMILSYLHLT 159
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 352 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 462
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q9VHR3 Cluster: CG11718-PA; n=2; Drosophila
melanogaster|Rep: CG11718-PA - Drosophila melanogaster
(Fruit fly)
Length = 819
Score = 33.1 bits (72), Expect = 5.0
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -1
Query: 420 ADLVPVLSSCQSEHEEPADQK*EFLLQQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCP- 244
A L+ SS Q+ D+ L QQ C HE P SS RHC P
Sbjct: 362 ASLIDQKSSSQAR-SSGHDELGNLLWQQDSCEF-----HEHYPSDSSCPVPPLRHCHAPG 415
Query: 243 HYHGNQTLTR 214
H H +TLTR
Sbjct: 416 HGHATKTLTR 425
>UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07400.1 - Gibberella zeae PH-1
Length = 333
Score = 32.7 bits (71), Expect = 6.7
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 315 KARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG----PAPGAPRSHT 482
KA +R G L AP G K Q+N R+ ++ G P P PRS +
Sbjct: 48 KAASRSTNIPGLTLAQSGAPENAPRGPKNGQADSQQNVRKGIKRKGKRHPPEPRKPRSES 107
Query: 483 KPYVRTKG 506
P V +KG
Sbjct: 108 PPKVPSKG 115
>UniRef50_Q5E0L8 Cluster: Acriflavin resistance periplasmic protein;
n=3; Vibrionaceae|Rep: Acriflavin resistance periplasmic
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 370
Score = 32.7 bits (71), Expect = 6.7
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -2
Query: 269 QSHVIVTVPTTTAIKPSRGGFFMWRAKRDTEIGGRLI 159
Q+ +++TVP T + ++GG F+W ++ ++ R+I
Sbjct: 285 QASLLITVPLTAVVPDNQGGQFVWVVTQENKVQKRII 321
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 282 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 410
K+T+ ++ A ++L++GG + F +L PTGK VL+
Sbjct: 83 KITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 197
Score = 32.3 bits (70), Expect = 8.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -1
Query: 300 EQPPSSSV----SCTVSRHCDCPHYHGNQTLTRWLLHVARQTRH 181
EQP + +V S+ DCP++H Q L +WL H+ + R+
Sbjct: 126 EQPRNITVPLFAEINASKVQDCPYFHYQQQLAQWLHHLDEEARY 169
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 371 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 267
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 32.3 bits (70), Expect = 8.8
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +3
Query: 99 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEATS*GFDCRGSGDSHNDVRLYKI 278
G ++CQ++ R +P++ +T+ CVS + S G + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 279 PKMTVAALHVTEKARARILA 338
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 8.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 195 RQTRHRDWWPVDTAHKEP 142
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,709,088
Number of Sequences: 1657284
Number of extensions: 12592964
Number of successful extensions: 35819
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35783
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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