Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00107
(465 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 87 2e-16
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 78 1e-13
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 77 3e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 68 1e-10
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 66 5e-10
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 64 1e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 2e-09
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 61 1e-08
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 60 2e-08
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 58 1e-07
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 56 5e-07
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 52 5e-06
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 50 2e-05
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 47 2e-04
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 46 3e-04
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 46 5e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 7e-04
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 44 0.002
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 43 0.004
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 42 0.005
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 42 0.005
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 42 0.005
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 42 0.009
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 40 0.020
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 40 0.035
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 38 0.11
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 38 0.14
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 38 0.14
UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1; Halo... 36 0.57
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 1.0
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.0
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 32 7.1
UniRef50_Q3IR48 Cluster: Transducer protein htr30; n=1; Natronom... 32 7.1
UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 86.6 bits (205), Expect = 2e-16
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +2
Query: 53 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 230 HAQYEKRARSYLRCQK 277
HA YEKR L+ K
Sbjct: 60 HAPYEKRTMELLKVSK 75
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
ELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 59 ELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
Score = 63.3 bits (147), Expect = 3e-09
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +2
Query: 53 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 232
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 233 AQYEKRARSYLRCQK 277
A YE+RA L+ K
Sbjct: 51 APYERRAMELLKVSK 65
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 76.6 bits (180), Expect = 3e-13
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
ELLKV KDKRALKFLKRRLGTHIRAKRKREELSN+L QM K
Sbjct: 39 ELLKVXKDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79
Score = 59.7 bits (138), Expect = 3e-08
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +2
Query: 149 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRARSYLRCQK 277
R P RLKG+QTKH+KFVRD++REVVGH EKR L+ K
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXK 45
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +1
Query: 226 RTRSI*EEG*ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
R R + ELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 51 RPRPVQRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 65.7 bits (153), Expect = 5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 61 EMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
Score = 49.6 bits (113), Expect = 3e-05
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +2
Query: 71 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 250
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 251 ARSYLRCQK 277
LR K
Sbjct: 59 VLEMLRISK 67
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 375
ELLKV KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
Score = 42.3 bits (95), Expect = 0.005
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = +2
Query: 77 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAR 256
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 257 SYLRCQK 277
L+ K
Sbjct: 62 ELLKVGK 68
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 262 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 357
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 375
ELLKV KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
Score = 49.6 bits (113), Expect = 3e-05
Identities = 30/73 (41%), Positives = 38/73 (52%)
Frame = +2
Query: 59 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 238
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 239 YEKRARSYLRCQK 277
YEKR L+ K
Sbjct: 56 YEKRITELLKVGK 68
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 60.5 bits (140), Expect = 2e-08
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 375
ELL++ KDKRALKF K+RLGTH+RAKRKRE+++ L R
Sbjct: 54 ELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
E KVSKDK+ALKF+++ LGTHI AKRK ELSNVLA R+
Sbjct: 65 EQFKVSKDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 55.6 bits (128), Expect = 5e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +2
Query: 41 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 220
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 221 VVGHAQYEK 247
V G A YE+
Sbjct: 58 VCGFAPYER 66
Score = 40.7 bits (91), Expect = 0.015
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 256 ELLKV---SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 70 ELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1
Query: 259 LLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
L KVS DK A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 60 LPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
Score = 35.5 bits (78), Expect = 0.57
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 53 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 232
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 233 AQYE 244
Y+
Sbjct: 51 MSYD 54
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
ELL+ SKDK+A K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 154 ELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
Score = 46.0 bits (104), Expect = 4e-04
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = +2
Query: 44 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 223
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 224 VGHAQYEKRARSYLRCQK 277
G + YEKR LR K
Sbjct: 143 AGFSPYEKRVMELLRNSK 160
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 46.8 bits (106), Expect = 2e-04
Identities = 29/73 (39%), Positives = 37/73 (50%)
Frame = +2
Query: 59 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 238
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 239 YEKRARSYLRCQK 277
YEKR L+ K
Sbjct: 56 YEKRITELLKVGK 68
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 67 ELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 125 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRARSYLR 268
K +T + + RP+R KG +K + FVR +VREV G A YE+R +R
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIR 60
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 375
EL++ S+DKRA K K+RLGT RAK K EEL++V+ R
Sbjct: 57 ELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 7e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 268 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 375
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +2
Query: 71 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 250
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 251 ARSYL 265
L
Sbjct: 60 MMELL 64
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +1
Query: 256 ELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 63 ELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
Score = 34.7 bits (76), Expect = 1.0
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 59 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 238
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 239 YEKR 250
YEKR
Sbjct: 57 YEKR 60
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +1
Query: 256 ELLKV---SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
EL+K+ + KR+LK+ K++LGTH R K KREE+ V+ R+
Sbjct: 81 ELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEIQKVVILQRR 124
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
E L+V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 62 EFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
+L++ S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 59 DLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
Score = 40.7 bits (91), Expect = 0.015
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +2
Query: 53 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 232
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 233 AQYEKRARSYLR 268
+ YE+R +R
Sbjct: 51 SPYERRLIDLIR 62
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 41.5 bits (93), Expect = 0.009
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 354
ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 52 ELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 40.3 bits (90), Expect = 0.020
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 360
ELLK DKRALK K+RLG+ K+KR++++N+
Sbjct: 64 ELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANI 98
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 39.5 bits (88), Expect = 0.035
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 62 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 241
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 242 EKR 250
EKR
Sbjct: 56 EKR 58
Score = 32.7 bits (71), Expect = 4.1
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 256 ELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 61 ELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 37.9 bits (84), Expect = 0.11
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 369
+L+K+ + + A +FLK+RLGTH RA +K L V+ +
Sbjct: 48 DLIKIERRRAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 37.5 bits (83), Expect = 0.14
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 137 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRARSYLRCQK 277
+K ++R ++ G TKH+KF+ + RE+ G A YE RA L+ K
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSK 116
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 37.5 bits (83), Expect = 0.14
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 101 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRARSYLR 268
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ L+
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLK 67
>UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Molybdopterin
oxidoreductase - Halorubrum lacusprofundi ATCC 49239
Length = 996
Score = 35.5 bits (78), Expect = 0.57
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 128 GITDKAIRIRPARLKGLQTKHSKFVRDLVREV--VGHAQYEKRARSYLRCQKTSVL*SS* 301
G TD I R L L+ + S++ + V E+ VG ++K AR + + ++
Sbjct: 405 GTTDGDIETRSVWLN-LRDELSEYTPERVNEITGVGRQTHQKIAREFAEVDRAKIIHGKG 463
Query: 302 SDDWAHTSAPRGSVKNLATCSLR*GRQ 382
+DW H S++ L T + GRQ
Sbjct: 464 VNDWYHNDLGNRSIQLLVTLTGNLGRQ 490
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 1.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 409 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 290
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 53 MAPRFEIAVGLRKGHKTTK 109
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 31.9 bits (69), Expect = 7.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 262 LKVSKDKRALKFLKRRLGTHIRAKRKREEL 351
LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 132 LKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q3IR48 Cluster: Transducer protein htr30; n=1;
Natronomonas pharaonis DSM 2160|Rep: Transducer protein
htr30 - Natronomonas pharaonis (strain DSM 2160 / ATCC
35678)
Length = 621
Score = 31.9 bits (69), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 164 RLKGLQTKHSKFVRDLVREVVGHAQYEKRARSYLRCQKTSVL*SS*SDDW 313
RL GL HS+FV + RE + A Y R R+ K + + ++W
Sbjct: 174 RLMGLDDDHSEFVGEDCRETIAVATYSDRQRAKTLADKVAAAPHTAHEEW 223
>UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 1489
Score = 31.5 bits (68), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 149 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRARS 259
R+R R+ GLQ H V DL AQ E+R R+
Sbjct: 211 RLRGLRVAGLQAAHRTLVHDLEHAAQARAQQERRRRA 247
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 244 EEG*ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 372
EE LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 73 EEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,612,953
Number of Sequences: 1657284
Number of extensions: 5775827
Number of successful extensions: 14328
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 14126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14321
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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