Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00107
         (465 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...    87   1e-17
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...    87   1e-17
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...    87   1e-17
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...    87   1e-17
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...    87   1e-17
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...    87   1e-17
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...    87   1e-17
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...    87   1e-17
AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO...    29   3.1  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 229
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 230 HAQYEKRARSYLRCQK 277
           HA YEKR    L+  K
Sbjct: 60  HAPYEKRTMELLKVSK 75



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +1

Query: 256 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 378
           ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 69  ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014297-385|ABI31142.1| 1689|Drosophila melanogaster CG34113-PO,
           isoform O protein.
          Length = 1689

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 28  SSDLSVRNHGSSF*NRSRPAKRPQNN*NIRWPQGYHRQSHQN*AS*TKGSSNE 186
           SS  S R+  S+  ++S   K+P    N R  +  H+Q HQ      KG++NE
Sbjct: 811 SSSRSRRSSSSNINSKSNNGKQPAKYFNKR-QKNMHKQKHQQKLKQLKGTTNE 862


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,923,398
Number of Sequences: 53049
Number of extensions: 271348
Number of successful extensions: 712
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)