Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00106
         (792 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0651 - 4844263-4844346,4844433-4844498,4844961-4845026,484...    30   2.4  
01_06_1018 - 33870063-33870209,33872044-33872094                       28   7.4  

>02_01_0651 -
           4844263-4844346,4844433-4844498,4844961-4845026,
           4845113-4845168,4845340-4845412,4845538-4845622,
           4845710-4845822,4845957-4846029,4846509-4846907,
           4846999-4847117
          Length = 377

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 776 GFMLSALGVPACCYYAVDC 720
           GF+  ALG+PA CY+A  C
Sbjct: 300 GFLAGALGIPADCYFAGVC 318


>01_06_1018 - 33870063-33870209,33872044-33872094
          Length = 65

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -2

Query: 791 SSLWA--GFMLSALGVPACCYYAVDC 720
           SS W   G  L+   VPACC+Y  DC
Sbjct: 27  SSSWTVQGRPLALESVPACCFYHPDC 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,550,150
Number of Sequences: 37544
Number of extensions: 162124
Number of successful extensions: 387
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)