Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00106
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   9.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = +3

Query: 462 NAPAKSEPQENTDKPNLNQITRTNKLINITI*TRSNKRILMETSVDLINKED 617
           N+P+     +N     + QI+   +   +T   + NKR L +++++ IN  +
Sbjct: 401 NSPSIFISDDNQKLTGIVQISNMTEYNGLTEPKKDNKRKLSDSTMNKINNHE 452


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 182 LSIIDLNRDKEVNGLVMRRQHHNRTAC 262
           L   D  RDK    LV  R+  N TAC
Sbjct: 187 LDTCDFTRDKVAPILVRARETPNYTAC 213


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 5   NVNKY*SKNNNIKTRKSLY 61
           N N Y   NNN    K LY
Sbjct: 100 NYNNYNYNNNNYNNYKKLY 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,262
Number of Sequences: 438
Number of extensions: 1925
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)