Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00105
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 178 3e-45
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 177 6e-45
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 177 8e-45
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 177 1e-44
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 177 1e-44
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 114 6e-26
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 114 6e-26
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 66 3e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 3e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 66 3e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 66 3e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 66 4e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 66 4e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 64 1e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 64 1e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 64 1e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 64 1e-10
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 63 3e-10
Z82276-6|CAJ15166.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 29 3.0
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 29 3.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 178 bits (434), Expect = 3e-45
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDLVSEYQQYQEATAD+E
Sbjct: 409 TEAESNMNDLVSEYQQYQEATADDE 433
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 177 bits (432), Expect = 6e-45
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDL+SEYQQYQEATA++E
Sbjct: 409 TEAESNMNDLISEYQQYQEATAEDE 433
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 177 bits (431), Expect = 8e-45
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDLVSEYQQYQEATA+E+
Sbjct: 409 TEAESNMNDLVSEYQQYQEATAEED 433
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 177 bits (430), Expect = 1e-44
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDLVSEYQQYQEA ADE+
Sbjct: 409 TEAESNMNDLVSEYQQYQEAAADED 433
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 177 bits (430), Expect = 1e-44
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDLVSEYQQYQEA ADE+
Sbjct: 409 TEAESNMNDLVSEYQQYQEAAADED 433
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 176 bits (429), Expect = 1e-44
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 180
VKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
Sbjct: 349 VKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408
Query: 181 TEAESNMNDLVSEYQQYQEATADEE 255
TEAESNMNDL+SEYQQYQEATA+++
Sbjct: 409 TEAESNMNDLISEYQQYQEATAEDD 433
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (275), Expect = 6e-26
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 7 TAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 186
T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+
Sbjct: 349 TDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTD 405
Query: 187 AESNMNDLVSEYQQYQE 237
AE+ +NDL+SE+QQY++
Sbjct: 406 AENKVNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (275), Expect = 6e-26
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 7 TAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 186
T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+
Sbjct: 349 TDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTD 405
Query: 187 AESNMNDLVSEYQQYQE 237
AE+ +NDL+SE+QQY++
Sbjct: 406 AENKVNDLISEFQQYEK 422
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +1
Query: 37 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 216
L+ A + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L
Sbjct: 371 LQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
Query: 217 EYQQ 228
+Y++
Sbjct: 431 DYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y
Sbjct: 377 AVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYA 436
Query: 226 QYQEATADEEQ 258
+ TAD E+
Sbjct: 437 EVSRDTADLEE 447
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + +
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEK 428
Query: 226 QYQEATADEEQ 258
Y+E AD +
Sbjct: 429 DYEEVGADSNE 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +1
Query: 58 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 237
I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ E
Sbjct: 384 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGE 443
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 65.7 bits (153), Expect = 4e-11
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +1
Query: 37 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 216
L+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 376 LQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 435
Query: 217 EYQQ 228
+Y++
Sbjct: 436 DYEE 439
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +1
Query: 58 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 237
I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ E
Sbjct: 356 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGE 415
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA DL + +
Sbjct: 369 AVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEK 425
Query: 226 QYQEATADEE 255
Y+E AD +
Sbjct: 426 DYEEVGADSD 435
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 226 Q 228
+
Sbjct: 434 E 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 373 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 432
Query: 226 Q 228
+
Sbjct: 433 E 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 226 Q 228
+
Sbjct: 434 E 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +1
Query: 46 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 225
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 226 Q 228
+
Sbjct: 434 E 434
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 58 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 237
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA DL + + Y+E
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEE 69
Query: 238 ATADEEQ 258
AD +
Sbjct: 70 VGADSNE 76
>Z82276-6|CAJ15166.1| 305|Caenorhabditis elegans Hypothetical
protein K03D3.12 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 474 TICSIHSLIFHQP--R*ELDLKFVKADLK*TLFIYIICATETKWRIKIRYLPTL 629
TICS+ S + H P + L ++++ L+IYI C T T +K+ Y+ L
Sbjct: 191 TICSVTSAMLHIPIVKKIRKLTYLESPRLNNLYIYIFCLTITVMVVKVIYISLL 244
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 16 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 171
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEYQQYQEATADEE 255
E+ + E +++D+ ++ +D+E
Sbjct: 743 EEWND-EEDLSDVGEDFDLDPTNHSDDE 769
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 16 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 171
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEYQQYQEATADEE 255
E+ + E +++D+ ++ +D+E
Sbjct: 743 EEWND-EEDLSDVGEDFDLDPTNHSDDE 769
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 43 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 222
MAA +G S+ I +L K + A F GEG+ E++ E D +S++
Sbjct: 2 MAARLLGTSSRIFKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWYVKEGDTISQF 61
Query: 223 QQYQEATADE 252
+ E +D+
Sbjct: 62 DKVCEVQSDK 71
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 16 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 171
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEYQQYQEATADEE 255
E+ + E +++D+ ++ +D+E
Sbjct: 743 EEWND-EEDLSDVGEDFDLDPTNHSDDE 769
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,782
Number of Sequences: 27780
Number of extensions: 320834
Number of successful extensions: 850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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