Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00104
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0045 + 22337089-22337385,22338437-22338715,22338728-223387... 115 4e-26
09_04_0372 + 17026551-17026778,17027469-17027830,17027925-170279... 113 1e-25
06_01_0755 + 5648872-5649471,5650092-5650453,5650576-5650619,565... 109 3e-24
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 107 1e-23
03_02_0454 + 8626832-8627134,8627255-8627606,8627705-8627748,862... 70 2e-12
09_06_0221 - 21649030-21649290,21649553-21649610,21649943-216502... 54 1e-07
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 36 0.042
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 33 0.22
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 32 0.52
08_02_1016 - 23606089-23607072 32 0.52
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 32 0.52
09_04_0437 - 17587944-17588909 31 0.90
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 30 2.1
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 29 2.8
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 29 2.8
07_03_1269 - 25339970-25340086,25340357-25340416,25341494-253415... 29 3.6
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 3.6
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 29 3.6
11_06_0378 - 22918499-22919275 29 4.8
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 29 4.8
08_01_0747 - 7000432-7001241 29 4.8
05_03_0532 - 15106553-15107362 29 4.8
05_03_0290 + 11707935-11708000,11709103-11709912 29 4.8
04_04_0048 + 22351788-22352177,22353175-22353711 29 4.8
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 29 4.8
10_08_0389 + 17465328-17465712,17465855-17465908,17466061-17468111 28 6.4
03_04_0083 - 17146422-17148068 28 6.4
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 28 6.4
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 28 6.4
01_01_0917 + 7238721-7239078,7239590-7239957 28 6.4
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998... 28 8.4
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 28 8.4
10_08_0642 - 19525774-19526554,19526657-19527075 28 8.4
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 8.4
>04_04_0045 +
22337089-22337385,22338437-22338715,22338728-22338798,
22338883-22338926,22340670-22340884,22340958-22341082,
22341142-22341220,22341278-22341367
Length = 399
Score = 115 bits (276), Expect = 4e-26
Identities = 59/127 (46%), Positives = 68/127 (53%)
Frame = +3
Query: 330 VSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAA 509
V ++E+G RG W PT +GYS QG CKFGFYE FK Y+ + E A Y+T +YLA
Sbjct: 114 VLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAG 173
Query: 510 LRRRNSSPTSPCRPWRR*GPYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQIP 689
P P F PK VK EGY YKG+VPLWGRQIP
Sbjct: 174 SASAEVIADIALCPMEAVKTQPG---FARGLSDGLPKFVKAEGYAGLYKGIVPLWGRQIP 230
Query: 690 YTMMKFA 710
YTMMKFA
Sbjct: 231 YTMMKFA 237
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 259 PLXLVKCRLQVDAEKYKNVVNG 324
PL LVKC +Q+D KYK++ +G
Sbjct: 90 PLDLVKCNMQIDPAKYKSISSG 111
>09_04_0372 +
17026551-17026778,17027469-17027830,17027925-17027968,
17028079-17028293,17028405-17028529,17028617-17028692
Length = 349
Score = 113 bits (273), Expect = 1e-25
Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 VSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLA- 506
V +RE+G RG WAPTF+GYS QG K+G YEVFK YA M E A Y+T +YLA
Sbjct: 91 VVMREQGARGFYRGWAPTFLGYSAQGAFKYGLYEVFKKEYADMAGPEYAARYKTLIYLAG 150
Query: 507 ALRRRNSSPTSPCRPWRR*GPYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQI 686
+ ++ + C + +PK+V+NE Y ++GLVPLWGRQI
Sbjct: 151 SATAEVAADVALCPMEAVKVRVQTQPGYARGLSDGFPKIVRNESYAGLFRGLVPLWGRQI 210
Query: 687 PYTMMKFA 710
PYTMMKFA
Sbjct: 211 PYTMMKFA 218
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 506 GSASAEFIADIALSPMEALR 565
GSA+AE AD+AL PMEA++
Sbjct: 150 GSATAEVAADVALCPMEAVK 169
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 259 PLXLVKCRLQVDAEKYKNVVN 321
PL ++KC +Q+D KYK+ +
Sbjct: 67 PLDVIKCNIQIDPTKYKSTTS 87
>06_01_0755 +
5648872-5649471,5650092-5650453,5650576-5650619,
5651324-5651538,5651643-5651767,5651862-5651931
Length = 471
Score = 109 bits (261), Expect = 3e-24
Identities = 56/128 (43%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 VSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAA 509
+ +E+GVRG W PT +GYS QG CKFGFYE FK Y+ + E A Y+T +YLA
Sbjct: 215 ILAKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYKTLIYLAG 274
Query: 510 LRRRNSSPTSPCRPWRR*G-PYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQI 686
P+ F PK +K+EG YKG+VPLWGRQI
Sbjct: 275 SASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFIKSEGALGLYKGIVPLWGRQI 334
Query: 687 PYTMMKFA 710
PYTMMKFA
Sbjct: 335 PYTMMKFA 342
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 259 PLXLVKCRLQVDAEKYKNVVNG 324
PL LVKC +Q+D KYK++ +G
Sbjct: 191 PLDLVKCNMQIDPAKYKSITSG 212
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 506 GSASAEFIADIALSPMEALR 565
GSASAE IAD+AL P EA++
Sbjct: 274 GSASAEVIADVALCPFEAVK 293
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 107 bits (256), Expect = 1e-23
Identities = 56/128 (43%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 330 VSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAA 509
V ++E+G RG W PT +GYS QG CKFGFYE FK Y+ + E A Y+T +YLA
Sbjct: 113 VLLKEQGPRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYKTLIYLAG 172
Query: 510 LRRRNSSPTSPCRPWRR*G-PYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQI 686
P+ F PK V++EG YKG+VPLWGRQI
Sbjct: 173 SASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQI 232
Query: 687 PYTMMKFA 710
PYTMMKFA
Sbjct: 233 PYTMMKFA 240
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 259 PLXLVKCRLQVDAEKYKNVVNG 324
PL LVKC +Q+D KYK++ +G
Sbjct: 89 PLDLVKCNMQIDPAKYKSITSG 110
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 506 GSASAEFIADIALSPMEALR 565
GSASAE IAD+AL P EA++
Sbjct: 172 GSASAEVIADVALCPFEAVK 191
>03_02_0454 +
8626832-8627134,8627255-8627606,8627705-8627748,
8629014-8629035,8629136-8629350,8629468-8629592,
8629681-8629756
Length = 378
Score = 70.1 bits (164), Expect = 2e-12
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +3
Query: 330 VSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAA 509
V ++E+G+ G W T +GYS QG CKFGFYE FK Y+ + E A ++TF+YLAA
Sbjct: 116 VLLQEQGLGGFFKGWMATLVGYSSQGACKFGFYEFFKKCYSDIAGPEHAEKWKTFIYLAA 175
Query: 510 LRRRNS-SPTSPCRPWRR*GPYPNHAWFREHPPRAWPKMVKNEGY--GTFYKGLVP--LW 674
+ + C F +PK+V++EG+ F G+ +
Sbjct: 176 SASAEMIADVALCPMEAVKVRVQTQPGFARCLTDGFPKIVQSEGFIKDYFLSGVAKFLIG 235
Query: 675 GRQIPYTMMKFA 710
+ YTM+KFA
Sbjct: 236 PHLLKYTMVKFA 247
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 259 PLXLVKCRLQVDAEKYKNVVNG 324
PL LVKC +QVD KY+++ +G
Sbjct: 92 PLDLVKCNMQVDPGKYRDISSG 113
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 509 SASAEFIADIALSPMEALR 565
SASAE IAD+AL PMEA++
Sbjct: 176 SASAEMIADVALCPMEAVK 194
>09_06_0221 -
21649030-21649290,21649553-21649610,21649943-21650292,
21650605-21650799
Length = 287
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +3
Query: 324 LKVSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 482
L + V+EEG L WA F GY QG CKFG YE FK Y+ +L D T
Sbjct: 78 LNILVKEEGASSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVLVDRNKST 130
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = -1
Query: 240 RPHDRXXPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEF 61
RP R R G P ++ + GTAA PPV +IAT + W A G G
Sbjct: 377 RPEQRGIDLRNRLSQRGSPKAETTAGTAA---APPVAAIATSPAIGW-VAPQPGAHPGRL 432
Query: 60 RAASS 46
AA +
Sbjct: 433 LAAGA 437
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 339 REEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAALRR 518
R +G+RGL PT IG C + Y+ K +Y L +T+ T + + AL
Sbjct: 249 RTDGIRGLYAGLCPTLIGMLPYSTCYYFMYDTIKTSYC-RLHKKTSLTRPELLVIGALSG 307
Query: 519 RNSSPTS 539
+S S
Sbjct: 308 LTASTIS 314
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 31.9 bits (69), Expect = 0.52
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 481 LTVPSCTWRLCVGGIHRRHRPVAH 552
+ P C W CVGG+ R +P+ H
Sbjct: 491 MVCPECGWCFCVGGLAHRAKPLGH 514
>08_02_1016 - 23606089-23607072
Length = 327
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 618 KMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 707
K V++EG YKG +P RQ P+T++ F
Sbjct: 283 KTVRSEGVMALYKGFIPTVSRQGPFTVVLF 312
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 31.9 bits (69), Expect = 0.52
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Frame = +3
Query: 336 VREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAALR 515
VREEG L P+ IG + Y+ K AY M T + +A
Sbjct: 274 VREEGPTELYRGLTPSLIGVVPYAATNYFAYDTLKKAYKKMFKTNEIGNVPTLLIGSAAG 333
Query: 516 RRNSSPTSP---CRPWRR*GPYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQI 686
+S+ T P R + G ++ + A ++++EG G Y+GL P + +
Sbjct: 334 AISSTATFPLEVARKHMQVGAVGGRKVYK-NMLHALLSILEDEGVGGLYRGLGPSCMKLV 392
Query: 687 PYTMMKF 707
P + F
Sbjct: 393 PAAGISF 399
>09_04_0437 - 17587944-17588909
Length = 321
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 618 KMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 707
K V++EG YKG VP RQ P+T++ F
Sbjct: 277 KTVRSEGAMALYKGFVPTVTRQGPFTIVLF 306
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = +3
Query: 336 VREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAALR 515
+REEG L P+ IG + Y+ K Y E T + +A
Sbjct: 276 LREEGPSELYRGLTPSLIGVVPYAATNYYAYDTLKKLYRKTFKQEEISNIATLLIGSAAG 335
Query: 516 RRNSSPTSP---CRPWRR*GPYPNHAWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQI 686
+S+ T P R + G ++ + A +++NEG G YKGL P + +
Sbjct: 336 AISSTATFPLEVARKQMQVGAVGGRQVYK-NVFHALYCIMENEGIGGLYKGLGPSCIKLM 394
Query: 687 PYTMMKF 707
P + F
Sbjct: 395 PAAGISF 401
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 609 AWPKMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 707
A+ K V+ EG G YKGLVP + +P + F
Sbjct: 305 AFRKTVRYEGVGALYKGLVPNSVKVVPSIAIAF 337
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 621 MVKNEGYGTFYKGLVPLWGRQIPYT 695
M+ NEG G+FYKGL RQ YT
Sbjct: 64 MLANEGIGSFYKGLSAGLLRQATYT 88
>07_03_1269 -
25339970-25340086,25340357-25340416,25341494-25341574,
25341647-25341801,25341894-25341978,25342106-25342174,
25342410-25342489,25342620-25342665,25342743-25342838,
25342921-25343031,25343141-25343344,25343430-25343632,
25344495-25344711
Length = 507
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 492 FVYLAALRRRNSSPTSPCRPW 554
FV AL +RNS PT RPW
Sbjct: 297 FVACRALSQRNSDPTKASRPW 317
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 567 PYPNH--AWFREHPPRAWPKMVKNEGYGTFYKGLVPLWGRQIPYTMM 701
P PN AW E PR+ P+ + G G F L P G +P+ MM
Sbjct: 517 PLPNSTTAWMAEAAPRSAPQRLPVPGTGVF---LPPGSGHALPHQMM 560
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 324 LKVSVREEGVRGLAN*WAPTFIGYSMQGLCKFGFYEVFK 440
+K R+ G+RGL AP+ G KF FYE K
Sbjct: 193 VKTIYRQNGLRGLYRGMAPSLYGIFPYSGLKFYFYETMK 231
>11_06_0378 - 22918499-22919275
Length = 258
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 431 FIETELAETLH*IPNESGSPSIGQTADALL 342
F+ET AE +P E + +G T DALL
Sbjct: 219 FVETPRAEPAPVVPQEGEASGVGSTEDALL 248
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 618 KMVKNEGYGTFYKGLVPLWGRQIPYT 695
KM+ NEG FYKGL RQ YT
Sbjct: 66 KMLANEGISAFYKGLSAGLLRQATYT 91
>08_01_0747 - 7000432-7001241
Length = 269
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 431 FIETELAETLH*IPNESGSPSIGQTADALL 342
F+ET AE +P E + +G T DALL
Sbjct: 230 FVETPRAEPAPVVPQEGEASGVGSTEDALL 259
>05_03_0532 - 15106553-15107362
Length = 269
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 431 FIETELAETLH*IPNESGSPSIGQTADALL 342
F+ET AE +P E + +G T DALL
Sbjct: 230 FVETPRAEPAPVVPQEGEASGVGSTEDALL 259
>05_03_0290 + 11707935-11708000,11709103-11709912
Length = 291
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 431 FIETELAETLH*IPNESGSPSIGQTADALL 342
F+ET AE +P E + +G T DALL
Sbjct: 252 FVETPRAEPAPVVPQEGETSGVGSTEDALL 281
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 618 KMVKNEGYGTFYKGLVPLWGRQIPY 692
K VK+EG +KG +P W R P+
Sbjct: 264 KTVKHEGLTALWKGFLPTWARLGPW 288
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 618 KMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 707
++V+ EG+G F+KG + ++PY+ + F
Sbjct: 59 RIVREEGFGAFWKGNLVTIVHRLPYSAISF 88
>10_08_0389 + 17465328-17465712,17465855-17465908,17466061-17468111
Length = 829
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 501 LAALRRRNSSPTSPCRPWRR*GPYPNHA 584
L LRRR SSP P WR YP+ A
Sbjct: 16 LPHLRRRRSSPRPPVPAWRPLSYYPSAA 43
>03_04_0083 - 17146422-17148068
Length = 548
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 614 PRSRRVLAKPGMVWIRTLAPPWATGRCRR*IPP 516
P +LA ++W+ P WA RCRR PP
Sbjct: 27 PLLAALLAVTSLLWLVPGGPAWALSRCRR--PP 57
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 561 SASMGDRAMSAMNSADAEPPGTRRY 487
S S D AM NS+D+E GTR +
Sbjct: 1800 STSTSDTAMKTSNSSDSEEEGTRHF 1824
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 567 PYPNHAWFREHPPRAWPKMVKNEGYGTFY 653
P P F +HPP+ P V G G FY
Sbjct: 328 PKPVQQQFNQHPPQRIPTPVDISGSGNFY 356
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 448 TPVCWTTRPPTLTVPSCTWRLCVG 519
+P+ WT PP+L S T R C G
Sbjct: 163 SPLAWTQPPPSLRTGSSTMRRCDG 186
>11_04_0169 +
14397380-14397652,14398317-14398874,14399593-14399823,
14399924-14400064,14401051-14401248,14401319-14401591,
14401959-14401976
Length = 563
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 38 SSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGG--MAASAAVPTES 175
SS +R PFR + S APV +E GG A AA P S
Sbjct: 39 SSRCSFSRGGPFRVHCAVTATTSAAAPVVVEAPGGGMRLAYAAAPDSS 86
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 621 MVKNEGYGTFYKGLVPLWGRQIPYTMMKF 707
+V+ G +KGLVP GR++P + F
Sbjct: 160 VVREAGMKGLFKGLVPTMGREVPGNAVMF 188
>10_08_0642 - 19525774-19526554,19526657-19527075
Length = 399
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 523 IHRRHRPVAHGGAKVRIQTMPGFASTLRERGRRWS 627
+HRR R A G A V++Q +P FA + W+
Sbjct: 185 LHRR-RDDATGAAGVQVQWLPSFAEVYKPPAAEWT 218
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -1
Query: 711 KQTSSSCTGSVCPRAAPGPCRTCRNLRS*PSSATLAEGARETRHGLDTDLSASMGDRAMS 532
++T+ + GS P G TC +S SSA ++ + R G + + M ++
Sbjct: 442 EKTNDASVGSFGPHGH-GAVLTCGPSQSVASSANGSDPHKMQRSGRASIPQSDMDKSSLG 500
Query: 531 AMNSADAEPPG 499
A S ++PPG
Sbjct: 501 AHQSLSSQPPG 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,355,877
Number of Sequences: 37544
Number of extensions: 464675
Number of successful extensions: 1752
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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