Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00104
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    27   0.58 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    27   0.58 
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.3  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.3  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    25   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.1  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.5  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   9.5  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 702 SSSCTGSVCPRAAPGPCRTCRN 637
           SSSC  S+ PR  P  C  CRN
Sbjct: 26  SSSCNNSLNPRTPPN-CARCRN 46


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 702 SSSCTGSVCPRAAPGPCRTCRN 637
           SSSC  S+ PR  P  C  CRN
Sbjct: 26  SSSCNNSLNPRTPPN-CARCRN 46


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 612 WPKMVKNEGYGTFYKG 659
           W K+ K EG G F+KG
Sbjct: 260 WVKIGKQEGSGAFFKG 275


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 612 WPKMVKNEGYGTFYKG 659
           W K+ K EG G F+KG
Sbjct: 260 WVKIGKQEGSGAFFKG 275


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 612 WPKMVKNEGYGTFYKG 659
           W K+ K EG G F+KG
Sbjct: 260 WVKIGKQEGSGAFFKG 275


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 588 FREHPPRAWPKMVKNEG 638
           F +HPP  WP+    EG
Sbjct: 387 FPQHPPLVWPEAADIEG 403


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = -1

Query: 702 SSSCTGSVCPRAAPGPCRTCRNLRS*PSSATLAE--GARETRH--GLDTDLSASMG 547
           S SC  SVC  +    C TC       +S + A   G++   H  GL  D +  +G
Sbjct: 21  SCSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVCGSKHHTHCTGLSRDSTRELG 76


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +2

Query: 509 SASAEFIADIALSPMEALRSVSKPCLVSRAPSASV 613
           SAS    ++ ++SP+++L   +K  L++ A +A+V
Sbjct: 101 SASTSNSSNASVSPVKSLNGSTKGLLLAAAAAAAV 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,728
Number of Sequences: 2352
Number of extensions: 14744
Number of successful extensions: 44
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)