BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00103
(782 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 24 6.1
AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein. 23 8.1
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 80 VVIGAHRH-LQRKCATHLEI*VLRCMV 3
V+I H L + C HL++ VL C++
Sbjct: 837 VIINRKEHKLTKGCGYHLDLFVLACLI 863
>AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 23.4 bits (48), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 708 TYLKKVKRNTPNEFKILLHSCFFYSLP-IRWNRLL 607
+Y+ V + + FK+L+ S F LP I+ +RL+
Sbjct: 20 SYMHNVPKGSETHFKVLVVSTQFEGLPLIKRHRLV 54
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,419
Number of Sequences: 2352
Number of extensions: 12561
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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