Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00103
         (782 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p pro...    29   7.2  
AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA...    29   7.2  

>AY113590-1|AAM29595.1|  705|Drosophila melanogaster RH41322p
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -3

Query: 720 FKICTYLKKVKRNTPNEFKILLHSCFFYSLPIRWNRLLQIRAGG*GAHGLKLR 562
           F   T L K+K   P   KI   S   Y+LP+ +  L +IRA      G  LR
Sbjct: 511 FYFGTLLTKIKDRLPEGVKISPCSARIYALPVEFLDLHKIRAPVGSCEGFDLR 563


>AE013599-3538|AAF46952.3|  705|Drosophila melanogaster CG9882-PA
           protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -3

Query: 720 FKICTYLKKVKRNTPNEFKILLHSCFFYSLPIRWNRLLQIRAGG*GAHGLKLR 562
           F   T L K+K   P   KI   S   Y+LP+ +  L +IRA      G  LR
Sbjct: 511 FYFGTLLTKIKDRLPEGVKISPCSARIYALPVEFLDLHKIRAPVGSCEGFDLR 563


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,372,227
Number of Sequences: 53049
Number of extensions: 520643
Number of successful extensions: 1103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)