Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00103
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    30   2.1  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    30   2.1  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    30   2.1  

>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
           protein ZK1067.1 protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -1

Query: 644 FFIPYLFAGIGYYRYARAGRELTGSNSEEISNTSPSESSVLQNLPRI 504
           F + +LF  + Y+R  R G++L  +   ++   +P ++SV  N+ RI
Sbjct: 829 FAVMFLFILLVYWRCQRIGKKLKIAEMVDMPELTPIDASVRPNMSRI 875


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
           protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -1

Query: 644 FFIPYLFAGIGYYRYARAGRELTGSNSEEISNTSPSESSVLQNLPRI 504
           F + +LF  + Y+R  R G++L  +   ++   +P ++SV  N+ RI
Sbjct: 829 FAVMFLFILLVYWRCQRIGKKLKIAEMVDMPELTPIDASVRPNMSRI 875


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
            kinase protein.
          Length = 1374

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -1

Query: 644  FFIPYLFAGIGYYRYARAGRELTGSNSEEISNTSPSESSVLQNLPRI 504
            F + +LF  + Y+R  R G++L  +   ++   +P ++SV  N+ RI
Sbjct: 880  FAVMFLFILLVYWRCQRIGKKLKIAEMVDMPELTPIDASVRPNMSRI 926


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,506,216
Number of Sequences: 27780
Number of extensions: 285627
Number of successful extensions: 682
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)