Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00102X
         (457 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    30   1.7  
BT022340-1|AAY54756.1|  368|Drosophila melanogaster IP11319p pro...    29   2.2  
AE014134-1637|AAF52775.2|  368|Drosophila melanogaster CG3769-PA...    29   2.2  

>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
           isoform A protein.
          Length = 1893

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  TLSSAPASIGPWSTTMTCSTARKCS 138
           +LSS+ +S   WS+  TCST   CS
Sbjct: 920 SLSSSSSSSSSWSSCTTCSTCSSCS 944


>BT022340-1|AAY54756.1|  368|Drosophila melanogaster IP11319p
           protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 93  PLVYHHDVQYSSKMFXKRVENLHFSLPHVPSIFGR 197
           PL++H   Q   KMF KR E    + P +  I GR
Sbjct: 4   PLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGR 38


>AE014134-1637|AAF52775.2|  368|Drosophila melanogaster CG3769-PA
           protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 93  PLVYHHDVQYSSKMFXKRVENLHFSLPHVPSIFGR 197
           PL++H   Q   KMF KR E    + P +  I GR
Sbjct: 4   PLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGR 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,500,401
Number of Sequences: 53049
Number of extensions: 441036
Number of successful extensions: 938
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)