Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00099
         (390 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   1.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   3.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   3.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   5.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   7.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   7.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   10.0 

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -3

Query: 286 TNISLFIMRCKPGAAGVRLYADLSSAERAGASGRPT 179
           T ++  I RC   A GVR+Y D       G  G  T
Sbjct: 94  TALADMISRCN--AVGVRIYVDTVINHMTGMGGTGT 127


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 268 IMRCKPGAAGVRLYADLSSAERAGASGRPT 179
           I RC   A GVR+Y D       G  G  T
Sbjct: 99  ISRCN--AVGVRIYVDTVINHMTGMGGTGT 126


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 268 IMRCKPGAAGVRLYADLSSAERAGASGRPT 179
           I RC   A GVR+Y D       G  G  T
Sbjct: 100 ISRCN--AVGVRIYVDTVINHMTGMGGTGT 127


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 107 QEYSQVFNTLIG*VPVKVPPGKL 39
           +EY  V +T++  V     PGKL
Sbjct: 231 REYENVNSTVVNWVNAGADPGKL 253


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 68  VPVKVPPGKLFFDITSGL 15
           VP++  PG LF     GL
Sbjct: 468 VPLRFDPGSLFVQNRGGL 485


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 217 SSAERAGASGRPTGPRRTVSVRTERLSVAGTISGGRC 107
           + +E   AS +PT    T   +T +   +G  S G C
Sbjct: 407 TESEPTQASEQPTESSTTQKPQTTKTPESGNESDGVC 443


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 127 TISGGRCKNILKYSIPSLVRY 65
           T+  G  +NI  ++IPS++++
Sbjct: 566 TLKIGVYRNIKNFNIPSILQF 586


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 242 RSTSVCRSVLSRAGWGIRTTN 180
           R+ ++C  +LS  G   +TTN
Sbjct: 319 RTPNICYKLLSNLGIFPKTTN 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,779
Number of Sequences: 336
Number of extensions: 1368
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)