Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00099
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 89 1e-18
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 89 1e-18
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 89 2e-18
04_04_1110 + 30973202-30973870 35 0.026
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 29 0.99
01_05_0305 + 20659199-20660026,20660147-20660179 29 1.3
07_01_1012 - 8576196-8576489,8576809-8577045 29 1.7
03_05_0528 - 25268396-25269217 29 1.7
03_05_0277 - 22651630-22651757,22652038-22652725 28 2.3
12_02_0020 - 12388777-12389062,12389637-12389818 28 3.0
01_01_0743 - 5763654-5766902 28 3.0
02_05_0291 + 27577915-27578199 27 4.0
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 27 5.3
09_03_0062 - 11969719-11970036,11970115-11970843 27 5.3
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 27 5.3
06_01_0238 + 1815258-1815581,1816286-1816530,1816612-1816765,181... 27 7.0
01_01_1180 - 9401669-9402412,9402672-9402698 27 7.0
07_03_1126 - 24166758-24166879,24166948-24167386,24167708-241678... 26 9.2
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 26 9.2
03_06_0691 + 35576319-35576702,35576803-35576885,35576972-355770... 26 9.2
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 26 9.2
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 89.0 bits (211), Expect = 1e-18
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 MQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRG 176
MQS KS+ YV+E F+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R G
Sbjct: 46 MQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSG 105
Query: 177 PVG-RPDAPARSAEDRSAY 230
P G RP P R DR +
Sbjct: 106 PPGDRPRGPPRFEGDRPRF 124
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 89.0 bits (211), Expect = 1e-18
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 MQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRG 176
MQS KS+ YV+E F+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R G
Sbjct: 46 MQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSG 105
Query: 177 PVG-RPDAPARSAEDRSAY 230
P G RP P R DR +
Sbjct: 106 PPGDRPRGPPRFEGDRPRF 124
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 MQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRG 176
MQS KS+ YV+E F+W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S + + G
Sbjct: 46 MQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSG 105
Query: 177 PVG-RPDAPARSAEDRSAY 230
P G RP P R DR +
Sbjct: 106 PPGDRPRGPPRFEGDRPRF 124
>04_04_1110 + 30973202-30973870
Length = 222
Score = 34.7 bits (76), Expect = 0.026
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 72 TNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAP 251
TN + + H PP +P +V + T D PA + +A + PA+P
Sbjct: 79 TNFPVAFAHAHHHAPPPPLPKAAALAVVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASP 138
Query: 252 GLHLMIKRLMLVQAQ--LILNLREAMDVA 332
L L + +V AQ L L+ R A+ VA
Sbjct: 139 SLDLSLGMSAMVAAQPFLFLDPRVAVTVA 167
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 29.5 bits (63), Expect = 0.99
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +3
Query: 12 LKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGP- 179
L S G WR F+ YLT E I YL +HL + +T RS+ + R+
Sbjct: 611 LDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDESRKYKG 667
Query: 180 ----VGRPDAPARSAED 218
+ +P PA S +D
Sbjct: 668 SLEYISQPSTPAGSNKD 684
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = +3
Query: 105 LHLPPEI-----VPATLKRSVRTETVRRGPVG--RPDAPARSAEDRSAYRRTPAAPGLHL 263
L LPP + A S+ TV GP G +P P + +++RR P+A G+ L
Sbjct: 122 LKLPPRLQAAAAAAAAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGVSL 181
Query: 264 MIK 272
K
Sbjct: 182 WRK 184
>07_01_1012 - 8576196-8576489,8576809-8577045
Length = 176
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 263 EVQTRGSRSTSVCRSVLSRAGWGIRTTNRATAYCLCT 153
EV GSR T + LS AGWG A A+ LC+
Sbjct: 142 EVVASGSRRTHLQMGALSSAGWG--DQGGAAAWLLCS 176
>03_05_0528 - 25268396-25269217
Length = 273
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 251 WFAPHDKKADVGPGSADLEFKGGYGRG 331
W++ + K + PGS +LE GGYG G
Sbjct: 95 WYSFNGYKVLI-PGSTELEINGGYGEG 120
>03_05_0277 - 22651630-22651757,22652038-22652725
Length = 271
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 216 DRSAYRRTPAAPGLHLMIKRLMLVQAQLILNLREAMDVAGLLHN 347
+RSA +RTP++ HL R+M+ A L L A A L N
Sbjct: 100 ERSAAKRTPSSSPYHLHHHRMMMAGAGLPLEAHAAFMRAALRVN 143
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 180 VGRPDAPARSAEDRSAYRRTPAAP 251
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>01_01_0743 - 5763654-5766902
Length = 1082
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 265 MRCKPGAAGVRLYADLSSAERAGASGRPTGPRRTVSVRTERLSVAGTI 122
+RC AA + + +SA R + R PR V V+ ERL AG +
Sbjct: 31 VRCDVLAASGHIL-EAASAPRGAKNSRSRAPRTDVDVQIERLCRAGEL 77
>02_05_0291 + 27577915-27578199
Length = 94
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 325 SIASLKFKIS*AWTNISLFIMRCKPGAAGVRLYADLSSA 209
S+ L+F + A T + + R PGAAG LYA L+ A
Sbjct: 8 SVPVLRFLLCFAATIPTGLMWRAVPGAAGRHLYAGLTGA 46
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 164 CLCTY*ALKCCRHNFRRKVQEYSQVFNTLIG 72
CL Y +LK R+ ++ QE++ +F+ L G
Sbjct: 804 CLPAYPSLKVTRNQLQKITQEHASIFHILSG 834
>09_03_0062 - 11969719-11970036,11970115-11970843
Length = 348
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 87 QYPHWLGTSKSASRQ 43
Q+PHWLGT+ AS++
Sbjct: 172 QHPHWLGTAGYASKE 186
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 131 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE 12
R+NFR KV+E S F + +G PP K+ D+ G++
Sbjct: 314 RNNFRAKVKEDSATFPSSLGMGRALSPP-KMSVDLEMGMK 352
>06_01_0238 +
1815258-1815581,1816286-1816530,1816612-1816765,
1817043-1817257,1817351-1817468,1817685-1817895,
1818133-1818194,1818306-1818524
Length = 515
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 244 AGVRLYADLSSAERAGASGRPTGPRRTVSVRTERLSVAGTISGG 113
A V L+AD +A R AS R R V++RTE + ++ G
Sbjct: 408 AVVALFADGPTAIRDVASWRVKETERMVAIRTELTKLGASVEEG 451
>01_01_1180 - 9401669-9402412,9402672-9402698
Length = 256
Score = 26.6 bits (56), Expect = 7.0
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 159 ETVRRGPVGRPD--APARSAEDRSAYRRTPAAPGLHLMIKRLMLVQAQLILNLREAMDVA 332
E R P R APA +A+ RSA T AAP +A +EA + A
Sbjct: 85 EDSRASPANRASSAAPAAAADPRSALTATTAAPAAPAAFSASEATEAAAATAAQEAAEAA 144
>07_03_1126 -
24166758-24166879,24166948-24167386,24167708-24167875,
24168388-24168675,24169468-24169575,24169759-24169811,
24170033-24170192,24170353-24170442,24170902-24170953,
24171156-24171283
Length = 535
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +3
Query: 135 TLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGLHLM 266
TL+ R T RG + RP A + S RSA RRTP P L L+
Sbjct: 436 TLQACKRQRTSPRGSILRPAARSTS---RSATRRTP-VPVLGLL 475
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 87 QYPHWLGTSKSASRQTV 37
Q+PHWLGT+ A Q V
Sbjct: 165 QHPHWLGTAGYAEDQRV 181
>03_06_0691 +
35576319-35576702,35576803-35576885,35576972-35577012,
35577974-35578018,35578217-35578371,35579116-35579265,
35579386-35579481,35579738-35579854,35579969-35580088,
35580170-35580262,35580351-35580467,35580815-35580931,
35581089-35581151,35581238-35581399
Length = 580
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -3
Query: 268 IMRCKPGAAGVRLYADLSSAERAGASGRPTGPRRTVSVRTERLSVA 131
++RC+ GAA V L D +++ A A+ TG TV+++ SVA
Sbjct: 49 VVRCQSGAAAVVLNKDDAASVAAAAASSATG--FTVAMKFGGSSVA 92
>02_05_0146 -
26267245-26267339,26267427-26267469,26267589-26267725,
26268172-26268299,26268419-26268495,26268593-26268679,
26268817-26268933,26269115-26269165,26269383-26269497,
26270033-26270292
Length = 369
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 233 SVCRSVLSRAGWGIRTTNRATAYCL 159
++ + + R WG R TNRAT + L
Sbjct: 336 AMANNSIDRRAWGSRLTNRATLHIL 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,595,998
Number of Sequences: 37544
Number of extensions: 177101
Number of successful extensions: 678
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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