Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00098X
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 69 4e-12
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 58 7e-09
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 50 1e-06
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 48 7e-06
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 47 1e-05
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 45 4e-05
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 44 9e-05
06_03_1255 + 28780181-28781172,28782065-28782932 43 2e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 42 5e-04
08_01_0397 - 3509186-3510291,3510322-3512335 41 8e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 41 8e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 41 8e-04
02_01_0381 - 2764331-2764342,2768966-2769907 40 0.001
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 38 0.004
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 38 0.006
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 38 0.006
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 37 0.010
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 37 0.010
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 37 0.013
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 36 0.017
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 36 0.030
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 36 0.030
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 35 0.053
03_05_0865 - 28365430-28367640 35 0.053
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 33 0.16
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 33 0.16
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 33 0.16
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 31 0.65
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 31 0.86
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 30 1.5
10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169 28 4.6
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 4.6
03_05_0092 - 20714102-20717902 28 6.1
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +1
Query: 247 PRLDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 426
P+ D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 427 Y 429
Y
Sbjct: 166 Y 166
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 411 SKFS*LCAQGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
+ F C Q + G+ EPTPIQ+QGWP+A+ GR + QTGSGKTL
Sbjct: 161 ANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTL 208
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +1
Query: 232 AEHATPRLDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 411
A+ A D L F KNFY P+V + EVE YR + E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 412 ANFPDYV 432
FP+YV
Sbjct: 96 VGFPEYV 102
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
Q + G+ EPTPIQ+QGWP+A+ GR + +TGSGKTL
Sbjct: 104 QEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTL 143
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 247 PRLD--SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANF 420
P LD ++ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + F
Sbjct: 167 PPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGF 226
Query: 421 P 423
P
Sbjct: 227 P 227
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
+ GY++PT IQ Q PI +SGR + +TGSGKT
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKT 270
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTLG 554
V+ G+ PTPIQAQ WPIA+ R I +TGSGKTLG
Sbjct: 195 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLG 233
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 337 EEYRNKHEVTVSGVEVHNPIQYFEEANFP 423
E YR KHE+T+ G E P F+ FP
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFP 188
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLG 554
Q + G+ PTPIQAQ WP+A+ R +A +TGSGKTLG
Sbjct: 617 QEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLG 657
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFP 423
S++P ++ F P+ P++ + YR HEVT G V P FE FP
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFP 612
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLG 554
++ G+ PTPIQAQ WPIA+ + +A +TGSGKTLG
Sbjct: 165 IQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLG 203
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 337 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVHK 438
E YR++HE+TV G V PI FE FP + K
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILK 163
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHL 563
+K +G+++P PIQAQ PI MSGR + +TGSGKTL L
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL 341
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 262 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 399
+ QPF KN Y + + EV YR E+ V G +V PI+
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIK 285
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR--I*LAYQTGSGKTL 551
+ ++ G ++PTPIQ QG P+A+SGR I +A+ TGSGKTL
Sbjct: 186 RALRGKGIEKPTPIQVQGLPVALSGRDMIGIAF-TGSGKTL 225
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 LCAQGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTL 551
LCA MG++ PT IQAQ P+AMSG+ + + TG+GKTL
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTL 76
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHL 563
+K +G+++P IQAQ PI MSGR + +TGSGKTL L
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL 480
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 262 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 399
+ QPF KNFY + K + EV YR + E+ V G +V PI+
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIK 424
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 450 MGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKTL 551
+G++EPTPIQ Q PI +SGR A TGSGKTL
Sbjct: 164 LGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTL 198
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
+ V GY+ PTP+Q PIA++GR +A QTGSGKT
Sbjct: 97 RNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKT 135
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGR--I*LAYQTGSGKTL 551
++ G +PTPIQ QG P+ +SGR I +A+ TGSGKTL
Sbjct: 197 LREKGIVQPTPIQVQGLPVVLSGRDMIGIAF-TGSGKTL 234
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 450 MGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
MG+KEPT IQA+ P A+ GR + QTGSGKT
Sbjct: 59 MGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKT 92
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 KTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTLGLHL 563
+ +GY++PTPIQA P+A++GR I + TGSGKT L
Sbjct: 210 EALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSL 250
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
+GV+ GY+ PTPIQ + P+ ++G I +TGSGKT
Sbjct: 39 RGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKT 77
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 426 LCAQGVKTMGYKEPTPIQAQGWPIAM-SGR-I*LAYQTGSGKTLGLHL 563
L V+ +G+KEPTPIQ +P A G+ + A +TGSGKTL L
Sbjct: 152 LLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHLA 566
Q + +GY PT +Q Q P+ +SG+ + + QTGSGKTL L+
Sbjct: 54 QRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 98
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 453 GYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
G++ P+PIQA WP + GR + TGSGKT+
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTI 144
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 450 MGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHL 563
MG+K PT IQA+ P A+ GR + QTGSGKT L
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFAL 39
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
+ ++ Y +PTP+Q PI+++GR +A QTGSGKT
Sbjct: 336 ENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKT 374
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
+ ++ Y +PTP+Q PI+++GR +A QTGSGKT
Sbjct: 250 ENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKT 288
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
++ Y PTP+Q PI+++GR +A QTGSGKT
Sbjct: 170 IRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKT 206
>03_05_0865 - 28365430-28367640
Length = 736
Score = 34.7 bits (76), Expect = 0.053
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
+ V+ GYKEP+PIQ P+ + R + +TGSGKT
Sbjct: 328 RAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKT 366
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 438 GVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
G+ G++ P+PIQ + PIA++G LA + G+GKT
Sbjct: 161 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 198
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 438 GVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
G+ G++ P+PIQ + PIA++G LA + G+GKT
Sbjct: 138 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 175
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 438 GVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
G+ G++ P+PIQ + PIA++G LA + G+GKT
Sbjct: 148 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 185
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 LCAQGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTL 551
L A ++ M Y T IQA+ P M G + + +TGSGKTL
Sbjct: 96 LTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTL 138
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 432 AQGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTL 551
A+ ++ M Y T IQA+ P ++G+ + A +TGSGKTL
Sbjct: 108 ARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTL 148
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
++ GY PTP+Q Q P ++ R + ++ TGSGKT
Sbjct: 197 LEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKT 233
>10_05_0040 - 8463585-8464396,8464664-8465273,8465708-8466169
Length = 627
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 522 PTKFFQT*LSASLELEWASVLCNPLSLHLVHIIRKI 415
P + + L S+++EW SV P +HL H+I +
Sbjct: 395 PAQIQELKLLESIDIEWGSVCIPPDIVHLPHLIHLV 430
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 322 SPYEVEEYRNKHEVTVSGVEVHN 390
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>03_05_0092 - 20714102-20717902
Length = 1266
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 495 SASLE-LEWASVLCNPLSLHLVH-IIRKICFFKVLNRIMNLNATYSYLVFISILFDFIW 325
S S+E L+W + L N SLHL + ++ K+ F L + L S F ++ +F W
Sbjct: 1113 SFSIEPLDWLNCLFNVCSLHLENTLLLKLSMFNRLRSLEILEIDGSRSFFDDLVEEFEW 1171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,765,847
Number of Sequences: 37544
Number of extensions: 290470
Number of successful extensions: 749
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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