Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00098X
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    37   5e-04
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   1.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.7  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   5.3  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   5.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 36.7 bits (81), Expect = 5e-04
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKTLGLHL 563
           V+   Y +PTPIQ    PI ++GR  +A  QTGSGKT    L
Sbjct: 189 VRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFML 230


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 160 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNYGFF 29
           RR+ A+  A ++F          I+   YF D+V DV L Y  +
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALY 102


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -3

Query: 233 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 138
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 122 WNHRFHGYYSNY 87
           W  R HGYY+NY
Sbjct: 197 WIIRPHGYYANY 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 310 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 402
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 428 MCTRCKDNGLQRTDAHSSSRLADSYVW 508
           M TR  D  +QR +  SS+   D Y W
Sbjct: 279 MMTRACDEVMQRANHLSSNPYRDLYSW 305


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,858
Number of Sequences: 2352
Number of extensions: 11374
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)