Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00098X
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 43 2e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.007
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 37 0.012
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 36 0.020
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 35 0.047
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 34 0.082
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 33 0.11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 33 0.11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 33 0.11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 33 0.11
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 33 0.11
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 33 0.11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 32 0.25
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 32 0.25
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 1.0
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 1.0
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 30 1.3
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 30 1.3
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 30 1.3
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 30 1.3
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 1.8
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z98866-17|CAB11566.3| 534|Caenorhabditis elegans Hypothetical p... 29 3.1
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 4.1
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 4.1
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 4.1
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 4.1
Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41017-8|AAC48210.1| 233|Caenorhabditis elegans T box family pr... 27 9.5
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 27 9.5
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +1
Query: 265 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVHKV 441
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +H++
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHEL 144
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 456 YKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTLGLHL 563
+++PT IQ+ WPIAMSGR I +TGSGKTL L
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFML 185
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHL 563
++ G+++P+PIQ+Q WP+ +SG+ + QTGSGKTL L
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLL 140
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
Q VK +GY EPTPIQ Q PI + R + +TGSGKT
Sbjct: 314 QAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKT 352
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 343 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVHK 438
+R +++ G V P++ +EEA FPD V++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQ 314
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
+ +KT GY PTP+Q P GR + QTGSGKT
Sbjct: 179 ENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKT 217
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTLGLHL 563
+K Y +PT IQAQ P MSGR + +TGSGKTL L
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLL 360
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 262 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQ 399
V + F KNFY + + + EV+ YR + +TV G++ PI+
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIK 304
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 444 KTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
K G PT IQ QG P+A+SGR + TGSGKT+
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTM 242
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 34.7 bits (76), Expect = 0.047
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 262 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVHKV 441
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 442 *RQWVTKNRRPFKLKA-GR*LCLEEFSWRTKRVPAKRWAYILPAI 573
R+ + P + A L + K K AY+ PAI
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAI 324
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR--I*LAYQTGSGKTL 551
+ ++ MG+ EPT IQ+ P A+ R + A +TGSGKTL
Sbjct: 168 EAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTL 208
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 453 GYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
GY +PTPIQ P+A++G+ I TG+GKT
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKT 199
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
+ ++ G+ +PTPIQ + P M G+ +A +TGSGKT
Sbjct: 37 KAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKT 75
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKT 548
+ ++ G+ +PTPIQ + P M G+ +A +TGSGKT
Sbjct: 37 KAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKT 75
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
+ V GY +PTP+Q P ++ R + QTGSGKT
Sbjct: 152 ENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKT 190
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
+ V GY +PTP+Q P ++ R + QTGSGKT
Sbjct: 136 ENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKT 174
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKT 548
+ V GY +PTP+Q P ++ R + QTGSGKT
Sbjct: 133 ENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKT 171
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
+ V+ GY TPIQ P+ G+ LA QTGSGKT
Sbjct: 311 RNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGRI*LA-YQTGSGKT 548
+ V+ GY TPIQ P+ G+ LA QTGSGKT
Sbjct: 311 RNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
+K + P+P+QA+ P+ + GR L ++G+GKTL
Sbjct: 37 LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGRI*LAY-QTGSGKTL 551
+K + P+P+QA+ P+ + GR L ++G+GKTL
Sbjct: 37 LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSG-RI*LAYQTGSGKT 548
+ V GY + TPIQ P+ G I QTGSGKT
Sbjct: 354 KNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSG-RI*LAYQTGSGKT 548
+ V GY + TPIQ P+ G I QTGSGKT
Sbjct: 354 KNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSG-RI*LAYQTGSGKT 548
+ V GY + TPIQ P+ G I QTGSGKT
Sbjct: 354 KNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 435 QGVKTMGYKEPTPIQAQGWPIAMSGR-I*LAYQTGSGKTLGL 557
+G+K Y +PT IQ +++G + A +TGSGKTL L
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLAL 130
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 105 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 221
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 160 RRIIAEFVASSKFGTTVSTAIIPI 89
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 160 RRIIAEFVASSKFGTTVSTAIIPI 89
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z98866-17|CAB11566.3| 534|Caenorhabditis elegans Hypothetical
protein Y49E10.20 protein.
Length = 534
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 377 LRFIILFNTLKKQIFLIMCTRCKDNGLQRTDAH--SSSRLADSYVWKNLVGVPNG 535
L+F+ N+L++++ +G+ DA S S++ Y W N+ +P G
Sbjct: 213 LQFLCETNSLQRRVGFFYGQNGTTDGIYEVDAGVPSPSKIGHLYTWNNMTEMPEG 267
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 277 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 98
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 97 IPITRHDYFSDLVEDVYLNYGFFL 26
P+TRH+ + + E +Y G+ L
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGL 721
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 277 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 98
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 97 IPITRHDYFSDLVEDVYLNYGFFL 26
P+TRH+ + + E +Y G+ L
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGL 729
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 277 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 98
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 97 IPITRHDYFSDLVEDVYLNYGFFL 26
P+TRH+ + + E +Y G+ L
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGL 729
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 277 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 98
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 97 IPITRHDYFSDLVEDVYLNYGFFL 26
P+TRH+ + + E +Y G+ L
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGL 721
>Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical
protein C41C4.1 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 248 GVACSALQRILFSHQSLQILQIYCHR-CQTETNYRRI 141
GVAC F + IL+++ HR C + YRR+
Sbjct: 100 GVACVLYDTGKFMRNNRSILEVWSHRFCGEKNEYRRM 136
>U41017-8|AAC48210.1| 233|Caenorhabditis elegans T box family
protein 41 protein.
Length = 233
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = -1
Query: 292 KSFC*KVGVKQNPIWASHVLPSREFFFPTKASRSSKSI 179
K C G+K +W S + +FF T + S+
Sbjct: 41 KFICHPAGIKMGALWTSRTISFEDFFITTNPQPTDNSM 78
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 271 QPFNK-NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 399
QP++ +F P PT++++ PY Y H + + + HN Q
Sbjct: 63 QPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,381
Number of Sequences: 27780
Number of extensions: 268194
Number of successful extensions: 844
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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