Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00097
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   2.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   6.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 353 GPAGGATHRPAHSGGGTPSRTLARTSSPGAL 261
           G   G   RPA+SG   PS    +T  P  L
Sbjct: 100 GDRNGDGGRPAYSGNSDPSMDQVKTDKPREL 130


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 267 PG*AGPSEGPRGGATAAVCRAVRGPAG 347
           PG AGP+  P GG         +GP G
Sbjct: 394 PGIAGPAGAPGGGEGRPGAPGPKGPRG 420


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -3

Query: 386  PRVPAASKAHTGPAGGATH-RPAHSGG--GTPSRTLAR--TSSPGA 264
            PR   +   HTGPAG  +  R    GG   TP  + AR   SSP +
Sbjct: 1420 PRPGGSGGGHTGPAGLISRWRDMEEGGRQSTPPASPARLARSSPAS 1465


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
 Frame = -3

Query: 479 LNYSANSQTCDGVIRAFATRNSLEFT*SSECPRVPAA------SKAHTGPAGGATHRPAH 318
           +N S      DG+ R+  TR+S         P +         S+ H  P GG       
Sbjct: 1   MNISTEYAPTDGMSRSSYTRSSYRSAYYGGPPEIGGTGAGALGSQQHQPPYGGGVETIGF 60

Query: 317 SGGGTPSR 294
           + GG+ SR
Sbjct: 61  ADGGSHSR 68


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 307 PPPLCAGRCVAPPAGPVCAFDAAGT-RGHSLLYVNSRLFRVAKARITPS 450
           PPP  +GR     +GP  A  AAGT R   L  +N+     A+  +  S
Sbjct: 738 PPPSESGRETPLLSGPSYAAAAAGTIRERELQNINNNNLTPAERELIMS 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,307
Number of Sequences: 2352
Number of extensions: 20452
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)