BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00097
(835 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1050|AAF46265.4| 1268|Drosophila melanogaster CG12690-P... 31 2.6
BT023873-1|AAZ86794.1| 512|Drosophila melanogaster AT21758p pro... 30 4.5
BT011461-1|AAR99119.1| 638|Drosophila melanogaster RE27685p pro... 30 4.5
BT011351-1|AAR96143.1| 638|Drosophila melanogaster RE74788p pro... 30 4.5
AY089362-1|AAL90100.1| 470|Drosophila melanogaster AT18578p pro... 30 4.5
AE014297-461|AAN13377.1| 646|Drosophila melanogaster CG1021-PB,... 30 4.5
AE014297-460|AAF54123.2| 646|Drosophila melanogaster CG1021-PA,... 30 4.5
AE014134-1275|AAF52515.1| 421|Drosophila melanogaster CG5261-PA... 30 4.5
AE014134-1274|AAF52514.1| 512|Drosophila melanogaster CG5261-PB... 30 4.5
X05273-1|CAA28885.1| 576|Drosophila melanogaster protein ( Dros... 29 5.9
BT016097-1|AAV36982.1| 576|Drosophila melanogaster LD31887p pro... 29 5.9
AY089423-1|AAL90161.1| 576|Drosophila melanogaster AT24588p pro... 29 5.9
AE013599-3117|AAM68191.1| 470|Drosophila melanogaster CG30293-P... 29 5.9
AE013599-1318|AAM68708.3| 576|Drosophila melanogaster CG17835-P... 29 5.9
AE013599-1317|AAM68707.3| 576|Drosophila melanogaster CG17835-P... 29 5.9
AE013599-1316|AAF58640.3| 576|Drosophila melanogaster CG17835-P... 29 5.9
AE013599-1315|AAM68709.2| 576|Drosophila melanogaster CG17835-P... 29 5.9
AE014297-3267|AAF56093.1| 660|Drosophila melanogaster CG13830-P... 29 7.8
>AE014298-1050|AAF46265.4| 1268|Drosophila melanogaster CG12690-PA
protein.
Length = 1268
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 473 YSANSQTCDGVIRAFATRNSLEFT*SSECPRVPAASKAHTGPAGGATHRPAHSGGG 306
Y A S T G SL+ + S P + S+ H G GG SGGG
Sbjct: 557 YYATSTTSAGTTTTTLQARSLQLSVSPPPPNMTPTSQVHNGSLGGGGGGGGGSGGG 612
>BT023873-1|AAZ86794.1| 512|Drosophila melanogaster AT21758p
protein.
Length = 512
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 307 PPPLCAGRCVAPPAGPVCAFDAAGTRGHSLLYVNSRLFRVAKAR 438
PPP A APP P A AAGT +Y + R+A+A+
Sbjct: 198 PPPAAAPAAAAPPPAPAAAPAAAGT---GRVYASPMAKRLAEAQ 238
>BT011461-1|AAR99119.1| 638|Drosophila melanogaster RE27685p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 374 AASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALIS 255
AA++ AGGAT AHS GGT + A T++ G S
Sbjct: 17 AATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATS 53
>BT011351-1|AAR96143.1| 638|Drosophila melanogaster RE74788p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 374 AASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALIS 255
AA++ AGGAT AHS GGT + A T++ G S
Sbjct: 17 AATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATS 53
>AY089362-1|AAL90100.1| 470|Drosophila melanogaster AT18578p
protein.
Length = 470
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 317 CVQGGAWPRRQDQCAPLMQPEREDIRYSM*TRGCFVSRKHVLRRHKFG 460
CVQ W R DQ A + R D S + ++ H+L+ HK G
Sbjct: 298 CVQQSKWSRMFDQLAKVPYATRGDQWVSYESPRSIWAKMHLLQEHKLG 345
>AE014297-461|AAN13377.1| 646|Drosophila melanogaster CG1021-PB,
isoform B protein.
Length = 646
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 374 AASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALIS 255
AA++ AGGAT AHS GGT + A T++ G S
Sbjct: 25 AATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATS 61
>AE014297-460|AAF54123.2| 646|Drosophila melanogaster CG1021-PA,
isoform A protein.
Length = 646
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 374 AASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALIS 255
AA++ AGGAT AHS GGT + A T++ G S
Sbjct: 25 AATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATS 61
>AE014134-1275|AAF52515.1| 421|Drosophila melanogaster CG5261-PA,
isoform A protein.
Length = 421
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 307 PPPLCAGRCVAPPAGPVCAFDAAGTRGHSLLYVNSRLFRVAKAR 438
PPP A APP P A AAGT +Y + R+A+A+
Sbjct: 107 PPPAAAPAAAAPPPAPAAAPAAAGT---GRVYASPMAKRLAEAQ 147
>AE014134-1274|AAF52514.1| 512|Drosophila melanogaster CG5261-PB,
isoform B protein.
Length = 512
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 307 PPPLCAGRCVAPPAGPVCAFDAAGTRGHSLLYVNSRLFRVAKAR 438
PPP A APP P A AAGT +Y + R+A+A+
Sbjct: 198 PPPAAAPAAAAPPPAPAAAPAAAGT---GRVYASPMAKRLAEAQ 238
>X05273-1|CAA28885.1| 576|Drosophila melanogaster protein (
Drosophila melanogastermRNA for invected gene (60kD
protein). ).
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>BT016097-1|AAV36982.1| 576|Drosophila melanogaster LD31887p
protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AY089423-1|AAL90161.1| 576|Drosophila melanogaster AT24588p
protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AE013599-3117|AAM68191.1| 470|Drosophila melanogaster CG30293-PA
protein.
Length = 470
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 317 CVQGGAWPRRQDQCAPLMQPEREDIRYSM*TRGCFVSRKHVLRRHKFG 460
CVQ W R DQ A + R D S ++ H+L+ HK G
Sbjct: 298 CVQQSKWSRMFDQLAKVPYATRGDQWVSYENPRSIWAKMHLLQEHKLG 345
>AE013599-1318|AAM68708.3| 576|Drosophila melanogaster CG17835-PD,
isoform D protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AE013599-1317|AAM68707.3| 576|Drosophila melanogaster CG17835-PC,
isoform C protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AE013599-1316|AAF58640.3| 576|Drosophila melanogaster CG17835-PB,
isoform B protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AE013599-1315|AAM68709.2| 576|Drosophila melanogaster CG17835-PA,
isoform A protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 386 PRVPAASKAHTGPAGGATHR-PAHSGGGTPSRTLARTSSPGALIS 255
P+ PA S + G GG + A GGG P RT+ G ++
Sbjct: 440 PKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLA 484
>AE014297-3267|AAF56093.1| 660|Drosophila melanogaster CG13830-PA
protein.
Length = 660
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 369 CSRNARTFATLCELEAVSCRESTYYAVTSLGVC 467
C + RT+++LC L+ +C ST + G C
Sbjct: 240 CGADNRTYSSLCRLDYHNCIHSTSIRIACKGFC 272
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,869,918
Number of Sequences: 53049
Number of extensions: 882541
Number of successful extensions: 3776
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3774
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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