Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00096
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   160   1e-41
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.67 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.88 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.88 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.88 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.88 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.88 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  160 bits (389), Expect = 1e-41
 Identities = 76/82 (92%), Positives = 82/82 (100%)
 Frame = +1

Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 435
           +PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEALQAG
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQAG 118

Query: 436 ADISMIGQFGVGFYSSYLVADR 501
           ADISMIGQFGVGFYS+YLVAD+
Sbjct: 119 ADISMIGQFGVGFYSAYLVADK 140



 Score =  117 bits (281), Expect = 1e-28
 Identities = 56/80 (70%), Positives = 61/80 (76%)
 Frame = +3

Query: 513 SKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXXS 692
           SK+NDDEQYVWESSAGGSFTV  D GEPLGRGTKIVLH+KED  EF+            S
Sbjct: 145 SKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVKKHS 204

Query: 693 QFIGYPIKLMVEKNAKKELS 752
           QFIGYPIKL+VEK  +KELS
Sbjct: 205 QFIGYPIKLVVEKEREKELS 224



 Score =  102 bits (244), Expect = 4e-24
 Identities = 53/59 (89%), Positives = 54/59 (91%)
 Frame = +2

Query: 77  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 57


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -3

Query: 656 FHEFCQVLFDVKDDLCTSTKGLTAVWADCERASCRR 549
           +H     L + K   C    G    W +C++A+C +
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 567 FTVRPDSGEPLGRGTKIVL 623
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 567 FTVRPDSGEPLGRGTKIVL 623
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 567 FTVRPDSGEPLGRGTKIVL 623
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 567 FTVRPDSGEPLGRGTKIVL 623
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 567 FTVRPDSGEPLGRGTKIVL 623
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 115 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSA 5
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMA 113


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 115 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSA 5
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMA 69


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 376 CSPNRPWSYQYRYR 335
           C P RPW   Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 215 HQHAWIWLVWLLSQ 228


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 441 HQHDWTVRCWLLLQ 482
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,967
Number of Sequences: 336
Number of extensions: 4002
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)