Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00096
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 136 2e-32
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 136 2e-32
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 136 2e-32
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 134 5e-32
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 98 7e-21
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 98 7e-21
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 95 6e-20
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 95 6e-20
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 89 2e-18
At2g39200.1 68415.m04815 seven transmembrane MLO family protein ... 29 3.4
At3g12540.1 68416.m01560 expressed protein contains Pfam profile... 28 6.0
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 28 7.9
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 136 bits (328), Expect = 2e-32
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 435
D SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL AG
Sbjct: 53 DKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG 112
Query: 436 ADISMIGQFGVGFYSSYLVADR 501
AD+SMIGQFGVGFYS+YLVAD+
Sbjct: 113 ADVSMIGQFGVGFYSAYLVADK 134
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
+KHNDDEQYVWES AGGSFTV D SGE LGRGTK+VL++KED E++
Sbjct: 139 TKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKH 198
Query: 690 SQFIGYPIKLMVEKNAKKELS 752
S+FI YPI L +EK +KE+S
Sbjct: 199 SEFISYPISLWIEKTIEKEIS 219
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 104 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 136 bits (328), Expect = 2e-32
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 435
D SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL AG
Sbjct: 53 DKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG 112
Query: 436 ADISMIGQFGVGFYSSYLVADR 501
AD+SMIGQFGVGFYS+YLVAD+
Sbjct: 113 ADVSMIGQFGVGFYSAYLVADK 134
Score = 97.9 bits (233), Expect = 7e-21
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
+KHNDDEQYVWES AGGSFTV D SGE LGRGTK+VL++KED E++
Sbjct: 139 TKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKH 198
Query: 690 SQFIGYPIKLMVEKNAKKELS 752
S+FI YPI L +EK +KE+S
Sbjct: 199 SEFISYPISLWIEKTIEKEIS 219
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 104 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 136 bits (328), Expect = 2e-32
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 435
D SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL AG
Sbjct: 53 DKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG 112
Query: 436 ADISMIGQFGVGFYSSYLVADR 501
AD+SMIGQFGVGFYS+YLVAD+
Sbjct: 113 ADVSMIGQFGVGFYSAYLVADK 134
Score = 97.5 bits (232), Expect = 9e-21
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
+KHNDDEQYVWES AGGSFTV D SGE LGRGTK++L++KED E++
Sbjct: 139 TKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMILYLKEDQMEYIEERRLKDLVKKH 198
Query: 690 SQFIGYPIKLMVEKNAKKELS 752
S+FI YPI L +EK +KE+S
Sbjct: 199 SEFISYPISLWIEKTIEKEIS 219
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 104 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 134 bits (325), Expect = 5e-32
Identities = 62/82 (75%), Positives = 75/82 (91%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 435
D SKLD EL+I+++P+K+ TL+IID+GIGMTKADLVNNLGTIA+SGTK FMEALQAG
Sbjct: 58 DKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG 117
Query: 436 ADISMIGQFGVGFYSSYLVADR 501
AD+SMIGQFGVGFYS+YLVA++
Sbjct: 118 ADVSMIGQFGVGFYSAYLVAEK 139
Score = 95.5 bits (227), Expect = 3e-20
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
+KHNDDEQYVWES AGGSFTV D GEPLGRGTKI L +K+D E++
Sbjct: 144 TKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKH 203
Query: 690 SQFIGYPIKLMVEKNAKKELS 752
S+FI YPI L EK +KE+S
Sbjct: 204 SEFISYPIYLWTEKTTEKEIS 224
Score = 94.3 bits (224), Expect = 8e-20
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +2
Query: 92 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
+ Q A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 3 DVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 56
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 97.9 bits (233), Expect = 7e-21
Identities = 48/86 (55%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ-- 429
+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL+
Sbjct: 125 EPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKEN 184
Query: 430 --AGADISMIGQFGVGFYSSYLVADR 501
GAD +IGQFGVGFYS++LVA++
Sbjct: 185 KDLGADNGLIGQFGVGFYSAFLVAEK 210
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +2
Query: 83 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSV 123
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 528 DEQYVWESSA-GGSFTVR--PDSGEPLGRGTKIVLHVKE-DLAEFMXXXXXXXXXXXXSQ 695
D+QYVWES A S+ +R D L RGT+I L+++E D EF SQ
Sbjct: 221 DKQYVWESVADSSSYLIREETDPDNILRRGTQITLYLREDDKYEFAESTRIKNLVKNYSQ 280
Query: 696 FIGYPIKLMVEKNAKKEL 749
F+G+PI EK+ E+
Sbjct: 281 FVGFPIYTWQEKSRTIEV 298
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 97.9 bits (233), Expect = 7e-21
Identities = 48/86 (55%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ-- 429
+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL+
Sbjct: 125 EPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKEN 184
Query: 430 --AGADISMIGQFGVGFYSSYLVADR 501
GAD +IGQFGVGFYS++LVA++
Sbjct: 185 KDLGADNGLIGQFGVGFYSAFLVAEK 210
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +2
Query: 83 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSV 123
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 528 DEQYVWESSA-GGSFTVR--PDSGEPLGRGTKIVLHVKE-DLAEFMXXXXXXXXXXXXSQ 695
D+QYVWES A S+ +R D L RGT+I L+++E D EF SQ
Sbjct: 221 DKQYVWESVADSSSYLIREETDPDNILRRGTQITLYLREDDKYEFAESTRIKNLVKNYSQ 280
Query: 696 FIGYPIKLMVEKNAKKEL 749
F+G+PI EK+ E+
Sbjct: 281 FVGFPIYTWQEKSRTIEV 298
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = +1
Query: 283 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 462
+L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q+ D+++IGQF
Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195
Query: 463 GVGFYSSYLVAD 498
GVGFYS+YLVAD
Sbjct: 196 GVGFYSAYLVAD 207
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
SKHNDD QYVWES A G F V D+ EPLGRGT+I LH++++ E++
Sbjct: 213 SKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRY 272
Query: 690 SQFIGYPIKLMVEKNAKKEL 749
S+FI +PI L K + E+
Sbjct: 273 SEFINFPISLWASKEVETEV 292
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +2
Query: 92 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +L
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLAL 123
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = +1
Query: 283 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQF 462
+L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q+ D+++IGQF
Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195
Query: 463 GVGFYSSYLVAD 498
GVGFYS+YLVAD
Sbjct: 196 GVGFYSAYLVAD 207
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 513 SKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXX 689
SKHNDD QYVWES A G F V D+ EPLGRGT+I LH++++ E++
Sbjct: 213 SKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRY 272
Query: 690 SQFIGYPIKLMVEKNAKKEL 749
S+FI +PI L K + E+
Sbjct: 273 SEFINFPISLWASKEVETEV 292
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +2
Query: 92 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +L
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLAL 123
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 89.4 bits (212), Expect = 2e-18
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ-- 429
+P +L I+I +K G +T+ D+GIGMT+ +LV+ LGTIA+SGT FM+AL+
Sbjct: 143 NPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKALKDS 202
Query: 430 --AGADISMIGQFGVGFYSSYLVADR 501
AG D ++IGQFGVGFYS++LVADR
Sbjct: 203 KDAGGDNNLIGQFGVGFYSAFLVADR 228
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +2
Query: 101 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 253
P E F +QAE+++LM LI+N+ YSNKE+FLRELISN+SDALDK+RY S+
Sbjct: 91 PPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSV 141
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 528 DEQYVWESSAGGS-FTVRPDSGEP--LGRGTKIVLHVKEDLAEFMXXXXXXXXXXXXSQF 698
D+QYVWE A S FT++ D+ + RGT+I LH+K++ F SQF
Sbjct: 239 DKQYVWEGEANSSSFTIQEDTDPQSLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQF 298
Query: 699 IGYPIKLMVEKNAKKEL 749
+ +PI EK KE+
Sbjct: 299 VSFPIYTWQEKGYTKEV 315
>At2g39200.1 68415.m04815 seven transmembrane MLO family protein /
MLO-like protein 12 (MLO12) identical to SP|O80961
MLO-like protein 12 (AtMlo12) {Arabidopsis thaliana},
membrane protein Mlo12 [Arabidopsis thaliana]
gi|14091594|gb|AAK53805; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 576
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 504 DCHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEF 650
D S+++ ++ + +S S + D P+ +IV HVK DL+EF
Sbjct: 524 DPESQNHSYQREITDSEFSNSHHPQVDMASPVREEKEIVEHVKVDLSEF 572
>At3g12540.1 68416.m01560 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 503
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 513 SDSHAVSDQVTGVEANTELSNHADVGTCLKSLHESF--STRFRDGSQIVHQIGLGHTNTG 340
SD + + + V+ T D+ CL ++ S+R R+GS+ V ++ L H
Sbjct: 162 SDGMSRTQEKNNVQETTPNGVSEDLVKCLMGIYLELNRSSREREGSKTVSKLSLTHLKNA 221
Query: 339 IDDRKSALVLVGNDLD 292
RKS ++LD
Sbjct: 222 SFKRKSVYDHNASNLD 237
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 128 QAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 250
++E+ + S + +TF S+ +++LR I + D+ D RY+S
Sbjct: 259 ESELMGMFSPLWHTFESSLQVYLRSSIDGAEDSYDG-RYDS 298
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,014,858
Number of Sequences: 28952
Number of extensions: 383180
Number of successful extensions: 1029
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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