Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00093
         (316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...    42   2e-04
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...    42   2e-04
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...    42   2e-04
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro...    26   8.8  
AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-P...    26   8.8  

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 196
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 16  MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75

Query: 197 XXXXXTVPLLGGKVHGSLA 253
                 +P+LGGKVHGSLA
Sbjct: 76  FELDLNIPMLGGKVHGSLA 94



 Score = 28.7 bits (61), Expect = 1.7
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 256 AGKVKGQTPKVE 291
           AGKVKGQTPKVE
Sbjct: 96  AGKVKGQTPKVE 107


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 196
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 197 XXXXXTVPLLGGKVHGSLA 253
                 +P+LGGKVHGSLA
Sbjct: 61  FELDLNIPMLGGKVHGSLA 79



 Score = 28.7 bits (61), Expect = 1.7
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 256 AGKVKGQTPKVE 291
           AGKVKGQTPKVE
Sbjct: 81  AGKVKGQTPKVE 92


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 196
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 197 XXXXXTVPLLGGKVHGSLA 253
                 +P+LGGKVHGSLA
Sbjct: 61  FELDLNIPMLGGKVHGSLA 79



 Score = 28.7 bits (61), Expect = 1.7
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +1

Query: 256 AGKVKGQTPKVE 291
           AGKVKGQTPKVE
Sbjct: 81  AGKVKGQTPKVE 92


>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p
           protein.
          Length = 1100

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 70  PGVHWSDQGTHSYSC 114
           PG++W+ +GTH   C
Sbjct: 34  PGINWTKEGTHDERC 48


>AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-PA
           protein.
          Length = 430

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 31  YQRAIDTRPGRQWPGVHWSDQGTHSYSC 114
           Y       P R W G HW++ G  S +C
Sbjct: 249 YGSCFGADPNRNW-GFHWNEVGASSSAC 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,011,655
Number of Sequences: 53049
Number of extensions: 193700
Number of successful extensions: 443
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)