Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00092
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 184 2e-45
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 158 2e-37
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 143 5e-33
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 139 8e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 138 1e-31
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 118 1e-25
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 118 1e-25
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 111 1e-23
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 103 4e-21
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 95 2e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 92 2e-17
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 90 5e-17
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 87 4e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 85 2e-15
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 85 2e-15
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 84 3e-15
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 83 5e-15
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 81 3e-14
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 80 5e-14
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 79 1e-13
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 79 1e-13
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 79 2e-13
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 78 2e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 76 8e-13
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 74 4e-12
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 71 2e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 4e-11
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 70 7e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 9e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 2e-10
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 67 4e-10
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 61 3e-08
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 61 3e-08
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 59 1e-07
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 59 1e-07
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 56 7e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 55 2e-06
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 55 2e-06
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 54 3e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 9e-06
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 53 9e-06
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 49 1e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 48 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 47 6e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 45 0.002
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.002
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 45 0.002
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 44 0.003
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 44 0.005
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 44 0.005
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.028
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 41 0.028
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.049
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 40 0.065
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.065
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 40 0.086
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 40 0.086
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 40 0.086
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 40 0.086
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 39 0.15
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 39 0.15
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 38 0.26
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 38 0.35
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 36 0.80
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 36 0.80
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 35 1.8
UniRef50_Q05FJ9 Cluster: 30S ribosomal protein S5; n=1; Candidat... 34 3.2
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.5
UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1; Strept... 33 9.9
UniRef50_Q381F3 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 184 bits (449), Expect = 2e-45
Identities = 97/159 (61%), Positives = 105/159 (66%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDK 393
K + E L IKE EIIDFFLG S+ DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 394 QRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTV 573
G + + + + G KIGKPHTVPCKVTG+CGSV V
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLV 193
Query: 574 RLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
RL PA RGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 194 RLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 232
Score = 117 bits (281), Expect = 4e-25
Identities = 63/129 (48%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSL---ISSSARP*MMRF*RSC 325
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S + + +S + +++
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI--MP 111
Query: 326 LYRNKHVPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 505
+ + + + + NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYW
Sbjct: 112 VQKQTRAGQRTRF-KAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYW 170
Query: 506 GTR-SESHT 529
G + + HT
Sbjct: 171 GNKIGKPHT 179
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 158 bits (383), Expect = 2e-37
Identities = 80/159 (50%), Positives = 102/159 (64%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDK 393
K + E L IKE++I+D+FL P +NDEV+K++PVQKQTRAGQRTRFKAFV IGD
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 394 QRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTV 573
G + + + + G +G PHTVP KV+GKCGSVTV
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTV 166
Query: 574 RLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
RL PA RG G+V+APV K+ LQ+AG++DCYT +RGST T
Sbjct: 167 RLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKT 205
Score = 111 bits (268), Expect = 1e-23
Identities = 58/127 (45%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYR 334
++++KEWVPVTKLGRLV+ GKI +E IYL+SL K + I P + +
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQ--IVDYFLPRLNDEVMKVVPV 85
Query: 335 NKHVPDSAHVS-RHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 511
K + + + ++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWGT
Sbjct: 86 QKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGT 145
Query: 512 R-SESHT 529
+ HT
Sbjct: 146 ALGDPHT 152
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 143 bits (346), Expect = 5e-33
Identities = 75/129 (58%), Positives = 84/129 (65%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
DEVLKIMPVQKQT AGQRTRF AFVAIGD + G + + +
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ G KIGKP+TVPCKVTG CGSV V L PA RGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 664 TSARGSTGT 690
TSAR T +
Sbjct: 168 TSARDCTAS 176
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 139 bits (336), Expect = 8e-32
Identities = 73/151 (48%), Positives = 92/151 (60%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
+KEF+IID L P + DEV+ I PVQKQTRAGQRTRFKA V +GD G + +
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSA 615
+ + G +G+PH++ K TGKCGSVTVRL PA RG+GIV++
Sbjct: 122 AGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVAS 181
Query: 616 PVPKKLLQMAGVQDCYTSARGSTGTWEILLK 708
P KKLLQ+AGV+D YT + G T T E LK
Sbjct: 182 PAVKKLLQLAGVEDVYTQSNGKTRTLENTLK 212
Score = 97.9 bits (233), Expect = 2e-19
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNK 340
++K WVPVTKLGRLV+ GKI +E I+L SL K + I + P + + K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ--IIDTLLPGLQDEVMNIKPVQK 88
Query: 341 HVPDSAHVS-RHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 511
+ ++ + +NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWGT
Sbjct: 89 QTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGT 146
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 138 bits (334), Expect = 1e-31
Identities = 72/154 (46%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = +1
Query: 232 EHLLVF-FTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYW 408
EH+ +F IKE +I++ F+G + DEV+KI PVQKQT AGQR RFKAFV +GD
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 409 FGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPA 588
G + + H + + G K+G+PHT+P KV GKCGSV VRL PA
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPA 188
Query: 589 TRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
RG GIV++ KK+L MAG+ D YT +RG T T
Sbjct: 189 PRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRT 222
Score = 102 bits (244), Expect = 1e-20
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +2
Query: 158 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSR---SLISSSARP*MMRF*RSCL 328
+D+ WVP TKLGRLV++GKI LE I+LFSL K + I + +M+ C
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKI---CP 101
Query: 329 YRNKHVPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 508
+ + + + + NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG
Sbjct: 102 VQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWG 161
Query: 509 TR-SESHT 529
++ E HT
Sbjct: 162 SKLGEPHT 169
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 118 bits (285), Expect = 1e-25
Identities = 63/126 (50%), Positives = 75/126 (59%)
Frame = +1
Query: 355 RTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTV 534
+ RFKAFVAIGD G + + + + + G +I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 535 PCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPH 714
P KVTG+CGSV VRL PA RGTG VSAPVPKKLL MAG+ DCYTSARG T TW L +
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTLPRLL 180
Query: 715 MLPLPR 732
++ PR
Sbjct: 181 LMRSPR 186
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKI 220
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 118 bits (285), Expect = 1e-25
Identities = 64/157 (40%), Positives = 88/157 (56%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD++ G + + +
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSA 615
L GKPHTV CK +GKCG+ V++ PA RGTGI+S
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISG 168
Query: 616 PVPKKLLQMAGVQDCYTSARGSTGTWEILLKPHMLPL 726
V KK+ ++AG++D YT + G+T T E K + L
Sbjct: 169 SVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAAL 205
Score = 73.7 bits (173), Expect = 4e-12
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSR---SLISSSARP*MMRF*RSC 325
++++ EW+P T +GRLV+ KI LE I+ FS + L +S + ++
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSI--KS 72
Query: 326 LYRNKHVPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 505
+ + + + ++ + GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 73 VQKQTRAGQKTRI-KAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLW 131
Query: 506 -GTRSESHTPS 535
G + + HT S
Sbjct: 132 DGAQGKPHTVS 142
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 111 bits (268), Expect = 1e-23
Identities = 63/125 (50%), Positives = 70/125 (56%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDK 393
K + E L IKE EIIDFFLG S+ DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 394 QRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTV 573
+ + + + G KIGKPHTVPCKVTG+C SV V
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLV 133
Query: 574 RLFPA 588
L PA
Sbjct: 134 HLIPA 138
Score = 102 bits (245), Expect = 8e-21
Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Frame = +2
Query: 176 VPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSL---ISSSARP*MMRF*RSCLYRNKHV 346
+PVTKLG L+ + KI LE IYLFSL K S + + +S + +++ + K
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI----MPVQKQT 56
Query: 347 PDSAHVS-RHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SE 520
H + +P+ NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWG + +
Sbjct: 57 CAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGK 116
Query: 521 SHT 529
HT
Sbjct: 117 PHT 119
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 103 bits (248), Expect = 4e-21
Identities = 72/150 (48%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWF 411
E L IKE EIID FLG ++ DEVLK +P QK TR GQ +KA GD
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVIT 121
Query: 412 GC-EVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPA 588
G EV + P V + G K KPHTV CKVTG GSV++ L PA
Sbjct: 122 GLDEVANTIQRVIILTKLPIVPVW----RGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPA 176
Query: 589 TRGTGIVSAPVPKKLLQMAGVQDCYTSARG 678
R T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 177 PRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 43.6 bits (98), Expect = 0.005
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 179 PVTKLGRLVREGKIDKLESIYLFSLQSKNSRSL---ISSSARP*MMRF*RSCLYRNKHVP 349
P +KLG LV++ +I L IYLFSL K + + + ++ + +++ L K
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLK----SLPEQK--- 102
Query: 350 DSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESH 526
V ++ NGH+ G+ EVA I+ IIL KL ++PV RGY G++ S+ H
Sbjct: 103 -GTRVGQYY-KAGDYNGHVITGLD---EVANTIQRVIILTKLPIVPVWRGYCGSKTSKPH 157
Query: 527 T 529
T
Sbjct: 158 T 158
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +1
Query: 487 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYT 666
S ++ LG KIGK H V CKVTG CGSV V L PA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 667 SARGSTGT 690
SARG T +
Sbjct: 61 SARGCTAS 68
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 91.9 bits (218), Expect = 2e-17
Identities = 53/98 (54%), Positives = 62/98 (63%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDK 393
K + E L IKE EIIDFFLG S+ DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRD- 60
Query: 394 QRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG 507
Y EV QG H R ++P + ++RLLG
Sbjct: 61 YNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLG 98
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 483 YQFEEVTGVQDRKATHRPLQGHRQVWFCNSPAXSCNSWYWNCVCASS*EASSDGWCTGLL 662
++ + + G QDR+A HRPLQG R + C +W+ + + + EA+ D W LL
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
Query: 663 HLSSWFNWHLG 695
HLS + H G
Sbjct: 151 HLSQGLHCHPG 161
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 90.2 bits (214), Expect = 5e-17
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = +1
Query: 541 KVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
KVTG+CGSV VRL PA RGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/52 (71%), Positives = 39/52 (75%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IKE EIIDFFLG S+ DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 390
K + E L IKE EIIDFFLG S+ DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 107
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 85.0 bits (201), Expect = 2e-15
Identities = 63/144 (43%), Positives = 81/144 (56%)
Frame = +1
Query: 259 KEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSR 438
K+ II FFL S+ DE IMPVQ QT R FK FV+I D + V +
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRD------YSSHVDLDDK 137
Query: 439 HCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAP 618
C S++ V+ + ++ ++G TV CKVTG+C SV + L P TR I+SAP
Sbjct: 138 -C-SKKTATAIVLVWKGTRET---RLGSL-TVSCKVTGQCVSVLICLIPPTRN--IISAP 189
Query: 619 VPKKLLQMAGVQDCYTSARGSTGT 690
VPKKLL +A + DCYTSARG T T
Sbjct: 190 VPKKLLLLANIDDCYTSARGCTAT 213
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 85.0 bits (201), Expect = 2e-15
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQR--SYWFGCEVQQ 429
+KE E++D + P + DEVL I VQ+ T +G+R +F+ VA+G++ Y G + Q
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQV 93
Query: 430 GSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIV 609
G + ++ + G+PHTV + GK GSV V L PA RG G+
Sbjct: 94 GGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLA 153
Query: 610 SAPVPKKLLQMAGVQDCYTSARGSTGT 690
+K+L++AG++D +T + G+T T
Sbjct: 154 GGETVRKVLELAGIEDIWTRSSGNTRT 180
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 84.2 bits (199), Expect = 3e-15
Identities = 63/148 (42%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQ 426
IK E I FF S N L P+ KQT Q+TRFKA V +G +G V
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVGS------YG-HVS 121
Query: 427 QGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGI 606
G ++ + + G K +PH VPC+VTG+CGS+ V L PA RGTG
Sbjct: 122 LGIKYSMEVAIILA-KLSIIPVETATGGKRLEPHMVPCRVTGRCGSLLVHLIPAPRGTGT 180
Query: 607 VSAPVPKKLLQMAGVQDCYTSARGSTGT 690
VSAPVP KLL MAG+ D +SA G T T
Sbjct: 181 VSAPVP-KLLMMAGIDDS-SSASGCTAT 206
Score = 74.1 bits (174), Expect = 3e-12
Identities = 50/121 (41%), Positives = 65/121 (53%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNKH 343
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P + ++C +
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIK---QTCTDQQTR 107
Query: 344 VPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTRSES 523
S V + GH+ LG+K S EV AIILAKLS++PV G R E
Sbjct: 108 FKASVTVGSY--------GHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRLEP 153
Query: 524 H 526
H
Sbjct: 154 H 154
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 83.4 bits (197), Expect = 5e-15
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
I E EI+D L P + EV+ I VQKQT AG+ +R+K V +G+ G +
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGYKI--GKPHTVPCKVTGKCGSVTVRLFPATRGTGIV 609
R + + + ++ G+PH++P KV GK GSV V L PA +GTG+V
Sbjct: 100 RVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLV 159
Query: 610 SAPVPKKLLQMAGVQDCYTSARGSTGTWE 696
V K LL AG++D +++ +G T T E
Sbjct: 160 VGSVLKTLLTYAGIKDAWSTTKGETRTTE 188
Score = 49.6 bits (113), Expect = 8e-05
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNKHV 346
+EW P T +G LV+EGKI ++ LF + I P +++ + +
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKE--LFDRNLPITEPEIVDVLLP-KLKYEVVDIKVVQKQ 67
Query: 347 PDSAHVSRH--LLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 499
D+ +SR+ L+ + +G++ +G +K++ AI+ AI AK++++PVRRG
Sbjct: 68 TDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRG 120
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 81.0 bits (191), Expect = 3e-14
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
I+E II L P + EV+ + +QK T GQ TRFKA VA G++ G +
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGY---KIGKPHTVPCKVTGKCGSVTVRLFPATRGTGI 606
R + + K G + + H+VP KV GK GSVT+ + PA RG G+
Sbjct: 133 RIAIEKATNAA-YLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGL 191
Query: 607 VSAPVPKKLLQMAGVQDCYTSARGSTGT 690
V+ K+LL++AG++D +T+A+GST T
Sbjct: 192 VAGGKIKRLLELAGLKDAWTTAKGSTPT 219
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +1
Query: 541 KVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
KVTG+CGSV VRLF A RGTGIVSAPVPKKLL MA + DCYT ARG T T
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTAT 173
Score = 63.3 bits (147), Expect = 6e-09
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IK EIIDFFLG S+ +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+P TKLG LV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 79.0 bits (186), Expect = 1e-13
Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Frame = +1
Query: 250 FTIKEFEIIDFFL---GPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCE 420
+ IKE EIID L N EVL I + T +G+R RF+ A+G+ R + G
Sbjct: 42 YQIKEPEIIDVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGN--RDGYVGLG 99
Query: 421 VQQGSR-HCHSRRYYPC*VVCFTSSKRLLGY---KIGKPHTVPCKVTGKCGSVTVRLFPA 588
+ G R+ + KR G + +PH+VP V GK GSV VRL P
Sbjct: 100 IGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPG 159
Query: 589 TRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
RG G+V V KK+L++AGVQD ++ G T T
Sbjct: 160 PRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Score = 52.8 bits (121), Expect = 9e-06
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 170 EWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCL--YRNKH 343
EW P TKLG +V+EG+I + I+ Q K +I R + L
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEP-EIIDVLLPEVNARENQEVLDIALTVR 73
Query: 344 VPDSAHVSRHLLPLATNN--GHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 499
+ DS R + A N G++GLG+ KEV AIR AI AKL+++ ++RG
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRG 127
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +1
Query: 262 EFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGC----EVQQ 429
E EI+D L P + ++VL + VQ+ ++G+R R++A V +G+K G EV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 430 GSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIV 609
R + V G G PH++P G CGSV V L PA RG G+V
Sbjct: 105 AIRKAIAHAKLSLIKVRVGCGSWECG--CGSPHSIPFTAKGACGSVKVELLPAPRGVGLV 162
Query: 610 SAPVPKKLLQMAGVQDCYTSARGSTGT 690
+ V K +L +AGV+D +T G T T
Sbjct: 163 AGNVAKAVLGLAGVKDAWTKTFGDTRT 189
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/115 (30%), Positives = 55/115 (47%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYR 334
K + + W P T++GR+V+EG I + I L ++ + + L +
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPE-IVDALLPDLEEQVLDVKLVQ 68
Query: 335 NKHVPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 499
H R + + NG++G+G+ SKEV AIR AI AKLS++ VR G
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVG 123
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 78.6 bits (185), Expect = 2e-13
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
I+E II L P + EV+ + +QK T GQ TRFKA VA G++ G +
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGY---KIGKPHTVPCKVTGKCGSVTVRLFPATRGTGI 606
R + ++ K G + + H+VP KV GK GSV + + PA RG G+
Sbjct: 114 RIAIEKANNQA-LLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGL 172
Query: 607 VSAPVPKKLLQMAGVQDCYTSARGSTGT 690
V+ ++LL++AG++D YT+A+GST T
Sbjct: 173 VAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 78.2 bits (184), Expect = 2e-13
Identities = 56/144 (38%), Positives = 73/144 (50%)
Frame = +1
Query: 277 DFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRR 456
D L ++ + ++I +K+T AGQ+TRFKAFV D EV R
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHV--SLEVATAIRGAIILD 58
Query: 457 YYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLL 636
+ S G KI KPHTV C+VT SV V A RGT I+SAPVPKKLL
Sbjct: 59 RSSIAIAWGGWS----GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 637 QMAGVQDCYTSARGSTGTWEILLK 708
+MA + D + ARG T + ++K
Sbjct: 115 RMASIDDGDSLARGCTAILDNVIK 138
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 395 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHTPS 535
NGH+ L EVATAIRGAIIL + S+ G+ G + ++ HT S
Sbjct: 40 NGHVSL------EVATAIRGAIILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 76.2 bits (179), Expect = 8e-13
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 2/153 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQR--SYWFGCEVQQ 429
+KE EI+D L P + DEVL I VQ+ T +G+R +F+ VA+G++ Y + Q
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQV 144
Query: 430 GSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIV 609
G + ++ + G +++ K GK GSVTV + PA +G G+
Sbjct: 145 GGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLA 204
Query: 610 SAPVPKKLLQMAGVQDCYTSARGSTGTWEILLK 708
+A + +L++AGV+D +T++ G+T T L K
Sbjct: 205 AAETVRNILELAGVEDAWTNSDGNTRTTVNLAK 237
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 73.7 bits (173), Expect = 4e-12
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGS 435
+KE++I+D+ + P + DEV+ I Q+ T +G+R + +G+ G + +
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEA 91
Query: 436 RHCHSRRYYPC*VVCFTSSKRLLGYKIG--KPHTVPCKVTGKCGSVTVRLFPATRGTGIV 609
+ + + ++ G KPHT+P V GK GSV+V L PA +G G+
Sbjct: 92 APAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLA 151
Query: 610 SAPVPKKLLQMAGVQDCYTSARGSTGT 690
V K +L+MAG+ D + A G T T
Sbjct: 152 VGDVVKVILRMAGIDDAWGFAAGHTKT 178
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNKHV 346
+EW P T+LGRLV G+I + L K + I P ++ + R + +
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQ--IVDYLIP-DLKDEVINIERAQRM 59
Query: 347 PDSAHVSRHLLP--LATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 499
DS + + + NG++G+G +KE A AI+ AI AKL+++ ++RG
Sbjct: 60 TDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRG 112
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 71.3 bits (167), Expect = 2e-11
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = +1
Query: 268 EIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQ-RSYWFGCEVQQGSRHC 444
+II+FFLG + DEVL+ M Q Q RTR K F + + + C + G+
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTLVNCSKEVGTA-- 103
Query: 445 HSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTG-KCGSVTVRLFPATRGTGIVSAPV 621
++R F++ G KIG PHT+PC VT + V V L A RGTG VSA V
Sbjct: 104 -AQRAITLLSFLFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASV 162
Query: 622 PKKLLQMAGV 651
PKKL +A +
Sbjct: 163 PKKLPLLASI 172
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/139 (26%), Positives = 73/139 (52%)
Frame = +1
Query: 268 EIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCH 447
++++ G S+ +V++ + V + T++G++ + K V +GD G + S+
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 448 SRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPK 627
+ + + GKP+T+ K +GK GSV V + PA +GTGIV++
Sbjct: 158 KAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQL 217
Query: 628 KLLQMAGVQDCYTSARGST 684
+L+++G++DC+T + G T
Sbjct: 218 NVLKISGIRDCFTKSFGRT 236
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 69.7 bits (163), Expect = 7e-11
Identities = 49/128 (38%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 331 QKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGY 510
QKQT+ GQ+ R K F GD G + + + K LG
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWV----------KMQLGE 50
Query: 511 -KIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 687
++ + V KVT GSV V L PA RGTGIVSAPV K L AG+ +CY SAR T
Sbjct: 51 TRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTA 110
Query: 688 TWEILLKP 711
T KP
Sbjct: 111 TLYNFSKP 118
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2
Query: 395 NGHIGLGVKCSKEVATAIRGAIILAKL 475
NGH+GLG+KCSKEVATA +G + +L
Sbjct: 22 NGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 69.3 bits (162), Expect = 9e-11
Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +1
Query: 247 FFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIG-DKQRSYWFGCEV 423
+ +KEFEI DFFL S+ D+VLKI+P+ + R Q TRF +F I C
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTINYGGHNGIGVKCSK 75
Query: 424 QQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTG 603
+ G+ S + C + G I KP T PCK TG S++ LFP T
Sbjct: 76 KVGTAVGLSS-WSSFLSSCLP--RDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF- 127
Query: 604 IVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
IVS VP+KL+ A + CYTSAR T T
Sbjct: 128 IVSVLVPRKLMLRASIDSCYTSARSYTVT 156
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.5 bits (160), Expect = 2e-10
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWF 411
E L I+E EI+D L P ++D+VL + +Q+ T +G+R RF +G+
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 412 ----GCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIGKPHT-VPCKVTGKCGSVTVR 576
G EV R + V + G G P T VP K+TG+ GS V
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESG---GGPGTSVPLKITGRSGSTRVT 127
Query: 577 LFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
L PA G G+V + +++L +AGV D ++ + G T T
Sbjct: 128 LMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
Score = 39.9 bits (89), Expect = 0.065
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 374 LLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 499
L + ++G++GL + KEVA+ IR AI AKL+++PV RG
Sbjct: 58 LCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRG 99
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +1
Query: 583 PATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 690
PA RGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 36
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/136 (27%), Positives = 63/136 (46%)
Frame = +1
Query: 295 SMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*V 474
+ + V+KI + K T+ G+ RF A V IGDK + FG +
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIK---- 103
Query: 475 VCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQ 654
++ L+ K K ++ V G+ G+ V L PA GTGI++ + ++++AG
Sbjct: 104 ---NANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 655 DCYTSARGSTGTWEIL 702
D YT +RG+ ++
Sbjct: 161 DIYTKSRGANAPMNVI 176
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 60.9 bits (141), Expect = 3e-08
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +1
Query: 331 QKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGY 510
QK+T G +TR++ +GDK G + + ++ +
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 511 KI--GKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 684
+ G PH++P +V GK GSV V L PA +G GIV+ KK+ ++AG++D + + G T
Sbjct: 132 ECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKT 191
Query: 685 GT 690
T
Sbjct: 192 KT 193
Score = 41.5 bits (93), Expect = 0.021
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESIY--LFSLQSKNSRSLISSSARP*MM-------RF*R 319
+EW P TKLGRLV+EGKI ++ I + ++ ++ + M +F
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLLPNLEVEFMKWRIIRGKFRS 64
Query: 320 SCLYR--NKHVPDSAHVSRHLLPL-ATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 490
YR K + ++ + +GH+G+G+ S ++ A AI AKL+++ V
Sbjct: 65 KKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKV 124
Query: 491 RRG 499
RG
Sbjct: 125 ARG 127
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/89 (38%), Positives = 45/89 (50%)
Frame = +1
Query: 154 QGRPERVGSCXQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSMNDEVLKIMPVQ 333
QG + P K + + +L IKEFE+ DF LG + D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 334 KQTRAGQRTRFKAFVAIGDKQRSYWFGCE 420
KQ +AG+R RFK V I D + G E
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVE 203
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 59.3 bits (137), Expect = 1e-07
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSY---WFGCEVQ 426
IKE++I+D FL ++ +E L I PVQKQT AGQ+TRFKA+V +GD + W +
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Query: 427 QGS--RHCHSRRYYPC*VVCFTSSKRLLG 507
QG+ C+ + C +S KR+LG
Sbjct: 151 QGAIQELCNLNQ---CQTQFDSSQKRILG 176
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/96 (32%), Positives = 51/96 (53%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNKH 343
++EWVP+TKLGRLV+ GKI LE+I+ FS+ K + ++ + + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQ-IVDHFLKTLKEEPLAIGPVQKQT 119
Query: 344 VPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIR 451
+ + + ++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 492 EEVTGVQDRKATHRPLQGHRQVWFCNSPAXSCNSWYWNCVCASS*EASSDGWCTGLLH 665
+ + G QDR TH P+Q R+ S S YW E ++GW LLH
Sbjct: 172 KRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+++LKI V K T+ G+ F A+GD + G G +
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRK-------AIA 63
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ K ++ + K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 64 AAKKNIVKISL-KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 664 TSARGS 681
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 56.4 bits (130), Expect = 7e-07
Identities = 38/128 (29%), Positives = 60/128 (46%)
Frame = +1
Query: 298 MNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VV 477
+ + V+ + V K + G+R RF A V +GDK FG Q +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKK-------A 64
Query: 478 CFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQD 657
+ K L+ I T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 65 VDDAKKNLISVPIVGT-TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 658 CYTSARGS 681
T + GS
Sbjct: 124 ILTKSLGS 131
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/123 (25%), Positives = 61/123 (49%)
Frame = +1
Query: 289 GPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC 468
GP ++VL++ + K + G+ F+A VA+GDK GC + +
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEK----- 122
Query: 469 *VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAG 648
+ K + I K +++P ++ + G+ +V + PA+ GTG+V+ + +L++AG
Sbjct: 123 --ASMEAKKTAITVPITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 649 VQD 657
Q+
Sbjct: 181 YQN 183
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 54.8 bits (126), Expect = 2e-06
Identities = 39/134 (29%), Positives = 64/134 (47%)
Frame = +1
Query: 301 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVC 480
+++V+KI V K + G+R F A +GD++ G +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKS-------- 82
Query: 481 FTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDC 660
S+K+ L K HT+P +V GK S V L P+T GTGI++ + +++ AG+QD
Sbjct: 83 IESAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 661 YTSARGSTGTWEIL 702
T + GS+ I+
Sbjct: 143 LTKSWGSSNPVNIV 156
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/67 (46%), Positives = 39/67 (58%)
Frame = -3
Query: 704 SKISQVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRVAGXSRTVTEPHLPVTLQGTVC 525
+K +V V+P A V QS P+ FLGT A+ +PVP AG T TEP P+TL G +C
Sbjct: 11 AKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LC 69
Query: 524 GFPILYP 504
G L P
Sbjct: 70 GACCLLP 76
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
K + KEW+PVTKLGRLV++ KI LE IYLFSL K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 52.8 bits (121), Expect = 9e-06
Identities = 32/126 (25%), Positives = 61/126 (48%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ V+++ V K + G++ +F+A V +GDKQ + GC + +
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKS-------AI 201
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ + ++ + K T P + G G+ V L PA+ GTG+++ + +L+MAGV++
Sbjct: 202 DARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 664 TSARGS 681
GS
Sbjct: 262 GKQLGS 267
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = -1
Query: 508 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTV 395
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTV 149
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 49.2 bits (112), Expect = 1e-04
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 292 PSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC* 471
P + ++V+KI + K + G R RF A V +GDK+ F + +
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEK-- 70
Query: 472 VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVS-APVPKKLLQMAG 648
+ K+L+ I T+P G+ G+ L PA++GTGIV+ + +L++ G
Sbjct: 71 -----AKKQLVRIPITGT-TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 649 VQDCYTSARGS 681
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +1
Query: 298 MNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGC----EVQQGSRHCHSRRYYP 465
+ ++++ + + K T+ G+ RF A IGD++ + FG EV R
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALK----- 132
Query: 466 C*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMA 645
++ + K+ K T+ +V GK G+ V + PA +GTG+++ K +L++
Sbjct: 133 ------SAKNNMYKVKMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELC 186
Query: 646 GVQDCYTSARG 678
G +D Y+ G
Sbjct: 187 GFKDVYSKNLG 197
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/132 (25%), Positives = 59/132 (44%)
Frame = +1
Query: 283 FLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYY 462
F ++V+ I V K T+ G+ RF A V +GDK+ G +
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 463 PC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQM 642
+ K L+ + + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 E-------AKKNLIRVPL-RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 643 AGVQDCYTSARG 678
AG+ D Y + G
Sbjct: 150 AGIADVYAKSLG 161
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAI 384
IKEFE+ DF L + D+VLK+M V+KQ AG+ RFK V I
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTI 57
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/126 (23%), Positives = 58/126 (46%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ ++KI V K T+ G++ F+A V IGD+ G + + +
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTD------ 81
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
K L+ I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 82 -GRKNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 664 TSARGS 681
GS
Sbjct: 141 AKQLGS 146
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ V+++ V K + G++ F+A V +GDKQ G ++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVG--------KAKEVIAAVQKSA 237
Query: 484 TSSKR-LLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQD 657
T+++R ++ + K T P + G G+ V L PA+ GTG+++ + +L+MAGV++
Sbjct: 238 TNARRNIITVPMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/126 (22%), Positives = 59/126 (46%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ V++I V K + G++ F+A + +GD G +
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSD------ 121
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ K L+ + K +++P ++G G+ V L PA+ GTG+++ + +L++AG+++
Sbjct: 122 -ARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 664 TSARGS 681
+ GS
Sbjct: 181 AKSLGS 186
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 390
IKE++I+D L + +EV+ I VQKQT G+ R KA VAIGD
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGD 105
Score = 36.7 bits (81), Expect = 0.61
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 179 PVTKLGRLVREGKIDKLESIYLFSLQSK 262
PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/115 (27%), Positives = 50/115 (43%)
Frame = +1
Query: 340 TRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLGYKIG 519
T+ G+R F V +GD++ FG H ++ +K+ +
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFG--------HGKAKEVTLAIAKGIEKAKKNVIRVPI 93
Query: 520 KPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 684
TVP V G G+ + + PA RGTG+V+ K + ++AG D T GST
Sbjct: 94 VDGTVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 595 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPHM 717
G+ +V+ VPKK+L+ AG++D +TS+RGST T +K M
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVKHQM 42
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 43.6 bits (98), Expect = 0.005
Identities = 31/134 (23%), Positives = 61/134 (45%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+++++I K T+ G+ F+ +G+K G +R
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIG--------KAREVPEAIRKAI 68
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+++KR + T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 69 SAAKRNIVEVPVINGTIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNIL 128
Query: 664 TSARGSTGTWEILL 705
T + GST + L
Sbjct: 129 TKSLGSTNPLNLAL 142
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/125 (23%), Positives = 58/125 (46%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ ++K+ + K T+ G+ RF V +G+++ +G + +
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIK------- 120
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ L +I K ++ +V G+ G+ V L PA +GTGI++ + ++++AG D Y
Sbjct: 121 AAHNSLHTIEIHKG-SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIY 179
Query: 664 TSARG 678
T G
Sbjct: 180 TKNLG 184
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -2
Query: 390 VANGNKCLETCALSGTCLFLYRHDL*NLIIHGRAEEEINDLEFFD 256
V +G++ LE L+GT L L HDL + ++ A+EEI+DLE F+
Sbjct: 70 VTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFN 114
Score = 40.3 bits (90), Expect = 0.049
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = -1
Query: 508 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVCRQWQQMP*NVCAVRHVFVSV 329
TPV S++ N QL +D+S ++G G FLAAL QT++ V + + A +
Sbjct: 31 TPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDE---GLEARTLTGTGL 87
Query: 328 QA*SLEPHHSWTGRGRNQ*SRIL*L---*RKQVNALEFVDFSFANKTAEFGXRNPLFLVF 158
+ H R + L L R QV+ L+ D + A++ + G NP VF
Sbjct: 88 LLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVF 147
Query: 157 L 155
L
Sbjct: 148 L 148
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 41.1 bits (92), Expect = 0.028
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 173 WVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
W PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 40.3 bits (90), Expect = 0.049
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +1
Query: 529 TVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 684
T+P +V K G V L PA+ GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 39.9 bits (89), Expect = 0.065
Identities = 31/126 (24%), Positives = 55/126 (43%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
++++ I V + G+R F A V +GDK+ +G +
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKD------ 144
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ L+ I TVP + K + V L PA +G GI+++ + ++++AG D Y
Sbjct: 145 -AQNNLIRVPIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 664 TSARGS 681
T + GS
Sbjct: 204 TKSYGS 209
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 39.9 bits (89), Expect = 0.065
Identities = 28/126 (22%), Positives = 58/126 (46%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+++L + K + G+R RF A V +GD+ G + +
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKA------- 71
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ K ++ + + T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ +
Sbjct: 72 VARKNMITVPV-ENGTIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNML 130
Query: 664 TSARGS 681
+ GS
Sbjct: 131 SKELGS 136
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 39.5 bits (88), Expect = 0.086
Identities = 32/126 (25%), Positives = 54/126 (42%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
++V+ I K + G+R F A +GDK G +
Sbjct: 73 EKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTE------- 125
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
+ KR++ + K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 126 NARKRMVSVTL-KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVL 184
Query: 664 TSARGS 681
T + GS
Sbjct: 185 TKSMGS 190
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 39.5 bits (88), Expect = 0.086
Identities = 27/127 (21%), Positives = 55/127 (43%)
Frame = +1
Query: 277 DFFLGPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRR 456
DF G + + ++++ V K + G+ F+ IG+ GC+ + R
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKR- 564
Query: 457 YYPC*VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLL 636
+ K ++ + T+P +V K + + PA GTG+++ + +L
Sbjct: 565 ------ALVDAKKSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 637 QMAGVQD 657
++AGVQ+
Sbjct: 619 ELAGVQN 625
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 383 LATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 490
+ NG +G+G + +EVATA++ A++ AK SV+ V
Sbjct: 541 IGNGNGLVGVGCQAGREVATAVKRALVDAKKSVVRV 576
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 39.5 bits (88), Expect = 0.086
Identities = 29/126 (23%), Positives = 57/126 (45%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ V++I V K + G++ F+A V +G++ G + G R+
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVG-KAGDVIGAVRKGVA------ 71
Query: 484 TSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCY 663
K+L+ + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 72 DGKKQLIEVPLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 664 TSARGS 681
GS
Sbjct: 132 AKQLGS 137
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 39.5 bits (88), Expect = 0.086
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
D+++ I V K + G+R F A V +GD++ FG H +R
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFG--------HGKAREVPEAIRKAT 75
Query: 484 TSSKR-LLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDC 660
++KR L+ + T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 76 EAAKRDLIFVPLRGGRTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHDV 135
Query: 661 YTSARGSTGTWEIL 702
+ GS+ + ++
Sbjct: 136 VAKSTGSSNPYNMV 149
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 38.7 bits (86), Expect = 0.15
Identities = 30/138 (21%), Positives = 60/138 (43%)
Frame = +1
Query: 289 GPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC 468
G + ++++ I V K + G+R F A V +GD + FG + S+
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISK----- 110
Query: 469 *VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAG 648
+ K ++ + + T+ G+ G+ V L A GTGI++ + + + G
Sbjct: 111 --ATAAAKKTMIRVPLREGRTLHHDGRGRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLG 168
Query: 649 VQDCYTSARGSTGTWEIL 702
V D T + G++ + ++
Sbjct: 169 VADVVTKSVGTSNPYNMI 186
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 38.7 bits (86), Expect = 0.15
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGC----EVQQGSRHCHSRRYYPC* 471
++++ I V K + G+R F A V +GD +G +V + R R
Sbjct: 18 EKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKDMA 77
Query: 472 VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGV 651
+V T ++P +V G G+ V L PA+ GTG+++ + +L+ AGV
Sbjct: 78 LVSLTDV------------SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGV 125
Query: 652 QDCYTSARGS 681
+ T GS
Sbjct: 126 SNILTKCLGS 135
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 37.9 bits (84), Expect = 0.26
Identities = 34/131 (25%), Positives = 55/131 (41%)
Frame = +1
Query: 289 GPSMNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC 468
G + D V+ I V K + G+ F A V +GD + G + ++
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 469 *VVCFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAG 648
F S R+ G T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMF-SVPRVRG-------TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 649 VQDCYTSARGS 681
+ D T + GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 37.5 bits (83), Expect = 0.35
Identities = 31/129 (24%), Positives = 55/129 (42%)
Frame = +1
Query: 298 MNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VV 477
+ D ++ I V K T+ G+ F A V +G++ +G + G +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLG-KAGEVPAAIAKGVEA--- 71
Query: 478 CFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQD 657
+ K L+ + T+P + G +V L PAT GTG+ + + +L GV D
Sbjct: 72 ---AKKNLIRVPVHNG-TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTD 127
Query: 658 CYTSARGST 684
++GS+
Sbjct: 128 VLAKSKGSS 136
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.3 bits (80), Expect = 0.80
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 529 TVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEIL 702
T+ V G+ G+ V + PA+ GTGI++ + + ++ GV + GST + I+
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPYNIV 147
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 36.3 bits (80), Expect = 0.80
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCF 483
+ V+ I V K + G+R F A V +GD G + P +
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYG---------KAKEVPAAIAKG 94
Query: 484 TSSKRLLGYKIGK-PHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDC 660
R +++ T+ V G+ + V L PA+ GTG+++ + +L+ AGV D
Sbjct: 95 VEEARKSFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDI 154
Query: 661 YTSARGS 681
+ GS
Sbjct: 155 LAKSLGS 161
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.1 bits (77), Expect = 1.8
Identities = 28/131 (21%), Positives = 56/131 (42%)
Frame = +1
Query: 310 VLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTS 489
++ + V K + G+R F V IGD++ GC + + ++ +
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKV--GCGIGKHLEVSEAKVK-----AVNAA 72
Query: 490 SKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQDCYTS 669
K ++ + + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 73 RKNMIRVHLRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 670 ARGSTGTWEIL 702
+ GS+ ++
Sbjct: 133 SIGSSNPHNVV 143
>UniRef50_Q05FJ9 Cluster: 30S ribosomal protein S5; n=1; Candidatus
Carsonella ruddii PV|Rep: 30S ribosomal protein S5 -
Carsonella ruddii (strain PV)
Length = 139
Score = 34.3 bits (75), Expect = 3.2
Identities = 27/136 (19%), Positives = 60/136 (44%)
Frame = +1
Query: 298 MNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDKQRSYWFGCEVQQGSRHCHSRRYYPC*VV 477
M +++KI V K + G+ + A +G+++++ G + + Y
Sbjct: 1 MEKKLIKIHRVTKVVKGGRIFSYTATSIVGNRKKNIGLGRGKSREVLESIKKSY------ 54
Query: 478 CFTSSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLFPATRGTGIVSAPVPKKLLQMAGVQD 657
+ K +L K + +P + K + V L+PA G++++ K++L + GV
Sbjct: 55 -LKAKKNILKLNFSK-NIIPYFLFAKHCATKVFLYPANDIIGLIASKYVKQVLNIIGVFS 112
Query: 658 CYTSARGSTGTWEILL 705
++ GST +++
Sbjct: 113 VFSKIHGSTNAINVVI 128
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -3
Query: 194 RVWXQEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQR 33
R +EPT S CR+ GR H R G HR+ IR R HRL +
Sbjct: 142 RCLSREPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSRE 201
Query: 32 PPL 24
PP+
Sbjct: 202 PPV 204
>UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1;
Streptomyces diastaticus|Rep: Type I polyketide synthase
- Streptomyces diastaticus
Length = 3179
Score = 32.7 bits (71), Expect = 9.9
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -3
Query: 731 LGNGSICGFSKISQVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRVAGXSRTVTEPHL 552
L G I +++ P PR + T A+ R+ L GADT +G R T +
Sbjct: 2608 LPGGGIVSLLAMAEGPDTPRVPTGLAATLALLRALLSRGADTPLWSVTSGAVRADTADTV 2667
Query: 551 PVTLQGTVCG 522
P Q VCG
Sbjct: 2668 PHPEQAAVCG 2677
>UniRef50_Q381F3 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 940
Score = 32.7 bits (71), Expect = 9.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 434 LPCCTSHPNQYDRCLSPMATNALKRVRC 351
LPC +P + RCL P++T + RC
Sbjct: 350 LPCAVEYPTECCRCLGPLSTTCSEATRC 377
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,425,958
Number of Sequences: 1657284
Number of extensions: 15601796
Number of successful extensions: 45582
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 42820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45391
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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