Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00092
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.9  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 137 GRDHDRVHEDRRGLYLH 87
           G+D   VH  RRGL LH
Sbjct: 14  GQDKHMVHWFRRGLRLH 30


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 499 TSSNW*NRQLSKDNSASNGSGD 434
           T+S+   R  +  NSASN SGD
Sbjct: 335 TASSKNYRSATGGNSASNSSGD 356


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 537 LQGHRQVWFCNSPAXSCNSWYW 602
           ++G R V   ++PA + N W W
Sbjct: 318 IRGIRVVLEVDTPAHAGNGWNW 339


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +2

Query: 326 LYRNKHVPDSAHVSRHLLPLATNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 505
           L + K  PD A + RH LP A       L  +CSK   T   G+  + +  ++  +R +W
Sbjct: 51  LEKGKCTPDGAELKRH-LPDA-------LHTECSKCSETQKNGSKKIMR-HLIDHKRDWW 101

Query: 506 GTRSESH 526
               E +
Sbjct: 102 NELEEKY 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,125
Number of Sequences: 336
Number of extensions: 3711
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)