Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00091
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.002
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   3.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.8  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   6.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 32.3 bits (70), Expect = 0.002
 Identities = 20/73 (27%), Positives = 30/73 (41%)
 Frame = -2

Query: 407 YISFVRAFVFCCMLYKSCVP*ILKIIVKMYQNLDHFGNFQCKSIFILMNRFGCCVSSRPN 228
           Y   V  F   C+ Y  C   I  + +     + HF    C  I   M+   CC     N
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF---CAFIIFTMHLLFCCAFIFFN 190

Query: 227 LFLIIILCLEYLS 189
           + L+ +LCL+Y +
Sbjct: 191 MHLLFLLCLDYFT 203



 Score = 23.4 bits (48), Expect = 0.96
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 414 KVIYFFCKSICVLLYVI*ILCA 349
           ++ YF+C SI   ++++ +LC+
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCS 76



 Score = 23.4 bits (48), Expect = 0.96
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 426 FFHNKVIYFFCKSICVLLYVI*ILCALDF 340
           FF   + YF+C  I   ++++ +LC   F
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
 Frame = -2

Query: 398 FVRAFV-FCCMLYKSCVP*ILKIIVKMYQNLD----HFGNFQCKSIFILMNRFGCCVSSR 234
           F  AF+ F   L   CV  IL  I   Y        H     C   F  M+   CC    
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFII 274

Query: 233 PNLFLIIILCLEY 195
             + L+ +LC+ Y
Sbjct: 275 FTMHLLFLLCIYY 287



 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 248 CVSSRPNLFLIIILCLEYLS 189
           CVS   N+ L+ +LC  Y +
Sbjct: 61  CVSITFNVHLLFLLCSGYFT 80


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -2

Query: 335 IIVKMYQNLDHFGNFQCKSIFILMNRFGCCVSSRPNLFLIIILCL 201
           +++  Y+ LD+F   +  +   L N F   +     +FL  I+ L
Sbjct: 206 LVIAEYKQLDYFDGSKVPACHTLANTFWSALYFLTIIFLFFIIPL 250


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 76  MYLRYYLNDKGDREYTLATIDPFG 147
           +Y  +Y++DK  R  +L  +D  G
Sbjct: 179 LYYSFYISDKAARPRSLQFVDSEG 202


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -2

Query: 230 NLFLIIILCLEYLSSGE--KRAGCADNVGFPNG 138
           NL ++   C  Y   G   K  GC+DN GF  G
Sbjct: 6   NLGIMHRHCFGYPFQGTTYKYTGCSDNDGFLPG 38


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 311 LDHFGNFQCKSIFILMNRFGCCVSSRPNLFLIIILCLEYLSS 186
           ++HF +F     F L  +    V +    FLI+++  E L+S
Sbjct: 481 INHFPHFTAARFFDLNRKTILGVLNALFTFLIVVVQFENLTS 522


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 169 PARFSPEDKYSRH 207
           P RF PE+   RH
Sbjct: 126 PERFRPENSQKRH 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,700
Number of Sequences: 336
Number of extensions: 2374
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)